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SCN18_31_3_15_R4_B_scaffold_3742

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_3742_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..478)
DNA (477bp) protein (159aa)
beta-lactamase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEAF
Uncharacterized protein {ECO:0000313|EMBL:GAM02104.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
beta-lactamase
SCN18_31_3_15_R4_B_scaffold_3742_2
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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552..866
DNA (315bp) protein (105aa)
transcriptional regulator n=2 Tax=Sphingomonas RepID=UPI0002F8855F
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJP70891.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_31_3_15_R4_B_scaffold_3742_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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871..1389
DNA (519bp) protein (173aa)
membrane protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEB1
Uncharacterized protein {ECO:0000313|EMBL:GAM02102.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
membrane protein
SCN18_31_3_15_R4_B_scaffold_3742_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1397..2176
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GNA9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02172.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
membrane protein
SCN18_31_3_15_R4_B_scaffold_3742_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2509..2898
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4D5_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57067.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_31_3_15_R4_B_scaffold_3742_6
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2933..3421
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQC4_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07781.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_31_3_15_R4_B_scaffold_3742_7
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3466..4965)
DNA (1500bp) protein (500aa)
RND efflux system, outer membrane lipoprotein, NodT family n=2 Tax=Sphingomonas wittichii RepID=A5VCN9_SPHWW
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ70055.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_31_3_15_R4_B_scaffold_3742_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4962..6086)
DNA (1125bp) protein (375aa)
ABC-2 type transporter n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCN8_SPHWW
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:ABQ70054.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_31_3_15_R4_B_scaffold_3742_9
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6093..6506)
DNA (414bp) protein (138aa)
Membrane protein n=4 Tax=Sphingobium RepID=T0ICW3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB19651.1}; Flags: Fragment;; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
ABC-2 type transporter
Displaying 9 items

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