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SCN18_31_3_15_R4_B_scaffold_1126

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_1126_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..249)
DNA (249bp) protein (83aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS34_PARL1
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:GAK45850.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
phospho-2-dehydro-3-deoxyheptonate aldolase
SCN18_31_3_15_R4_B_scaffold_1126_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(363..1745)
DNA (1383bp) protein (461aa)
NADPH-glutathione reductase {ECO:0000313|EMBL:AKI00242.1}; EC=1.8.1.7 {ECO:0000313|EMBL:AKI00242.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
gor; glutathione reductase (EC:1.8.1.7)
Glutathione reductase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C647_9RHIZ
SCN18_31_3_15_R4_B_scaffold_1126_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1742..2449)
DNA (708bp) protein (236aa)
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Ribose-5-phosphate isomerase A n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWE4_9BRAD
SCN18_31_3_15_R4_B_scaffold_1126_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2507..4336)
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXP1_PARL1
glucosamine--fructose-6-phosphate aminotransferase
SCN18_31_3_15_R4_B_scaffold_1126_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4337..5689)
DNA (1353bp) protein (451aa)
glmU; glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157)
Bifunctional protein GlmU n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ76_9PROT
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCN18_31_3_15_R4_B_scaffold_1126_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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5822..6502
DNA (681bp) protein (227aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000255|HAMAP-Rule:MF_00495}; Short=PGP {ECO:0000255|HAMAP-Rule:MF_00495};; Short=PGPase {ECO:0000255|HAMAP-Rule:MF_00495};; EC=3.1.3.18 {ECO:0000255|HAMAP-Rule:MF_00495};; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
Phosphoglycolate phosphatase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=GPH_CAUCR
SCN18_31_3_15_R4_B_scaffold_1126_trna_1
unknown

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6765..6836
DNA (72bp)
transferRNA Val
SCN18_31_3_15_R4_B_scaffold_1126_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7598..8878
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae MGH 32 RepID=V3Q5C0_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:CDI04329.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1126_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9237..12143
DNA (2907bp) protein (969aa)
UPI0003CE6481 related cluster n=1 Tax=unknown RepID=UPI0003CE6481
Uncharacterized protein {ECO:0000313|EMBL:ESY18277.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1126_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12140..15007
DNA (2868bp) protein (956aa)
UPI0003CF1742 related cluster n=1 Tax=unknown RepID=UPI0003CF1742
Uncharacterized protein {ECO:0000313|EMBL:KGJ12680.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
helicase domain-containing protein
SCN18_31_3_15_R4_B_scaffold_1126_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14988..15950)
DNA (963bp) protein (321aa)
UPI0003CF46DC related cluster n=1 Tax=unknown RepID=UPI0003CF46DC
Uncharacterized protein {ECO:0000313|EMBL:ESY18279.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1126_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15947..18106)
DNA (2160bp) protein (720aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07PM4_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ06110.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Displaying 12 items

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