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SCN18_31_3_15_R4_B_scaffold_1155

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_1155_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2..604
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FAF518
Enoyl-CoA hydratase {ECO:0000313|EMBL:ETR77002.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
enoyl-CoA hydratase/isomerase
SCN18_31_3_15_R4_B_scaffold_1155_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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735..1892
DNA (1158bp) protein (386aa)
hemolysin D n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002DC854A
Antibiotic transporter {ECO:0000313|EMBL:KFJ90262.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
RND family efflux transporter MFP subunit
SCN18_31_3_15_R4_B_scaffold_1155_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1901..5023
DNA (3123bp) protein (1041aa)
Acriflavin resistance protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1Y4_9PROT
Acriflavin resistance protein {ECO:0000313|EMBL:EGY00472.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
SCN18_31_3_15_R4_B_scaffold_1155_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5045..5830)
DNA (786bp) protein (262aa)
spnH; o-methyltransferase id=14424051 bin=bin11_novelCP species=Photorhabdus asymbiotica genus=Photorhabdus taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin11_novelCP organism_group=Unknown_CP
spnH; probable o-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_WWE3_53_10_curated
SCN18_31_3_15_R4_B_scaffold_1155_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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6115..6492
DNA (378bp) protein (126aa)
Rrf2 family transcriptional regulator n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000371E3BB
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:GAM96776.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
BadM/Rrf2 family transcriptional regulator
SCN18_31_3_15_R4_B_scaffold_1155_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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6691..8139
DNA (1449bp) protein (483aa)
PREDICTED: uncharacterized protein LOC102338577 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C196B9
phosphate-selective porin O and P
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_31_3_15_R4_B_scaffold_1155_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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8179..9189
DNA (1011bp) protein (337aa)
Sulfate ABC transporter, periplasmic sulfate-binding protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T126_CAUSK
sulfate ABC transporter substrate-binding protein
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:ABZ73674.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_31_3_15_R4_B_scaffold_1155_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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9192..10037
DNA (846bp) protein (282aa)
Sulfate transport system permease protein n=2 Tax=Bordetella bronchiseptica RepID=K0MUR8_BORBM
Sulfate ABC transporter, permease protein CysT {ECO:0000313|EMBL:KCB36568.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
cysU; sulfate transport system permease
SCN18_31_3_15_R4_B_scaffold_1155_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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10048..10887
DNA (840bp) protein (280aa)
Sulfate ABC transporter, inner membrane subunit CysW n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S104_9SPHN
sulfate ABC transporter, inner membrane subunit CysW
Sulfate ABC transporter, inner membrane subunit CysW {ECO:0000313|EMBL:AGH48603.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCN18_31_3_15_R4_B_scaffold_1155_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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10898..11641
DNA (744bp) protein (248aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
Sulfate/molybdate ABC transporter ATPase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VV87_9GAMM
sulfate ABC transporter
SCN18_31_3_15_R4_B_scaffold_1155_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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11777..12178
DNA (402bp) protein (134aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YD59_9BRAD
response regulator
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_31_3_15_R4_B_scaffold_1155_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12188..12559)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000300C088
arsC; arsenate reductase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_31_3_15_R4_B_scaffold_1155_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12621..12995)
DNA (375bp) protein (125aa)
SCN18_31_3_15_R4_B_scaffold_1155_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13464..13814
DNA (351bp) protein (117aa)
SCN18_31_3_15_R4_B_scaffold_1155_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13935..14618
DNA (684bp) protein (228aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFP4_PHEZH
CarD family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACG77125.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_31_3_15_R4_B_scaffold_1155_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14710..17826
DNA (3117bp) protein (1039aa)
adenylate cyclase (EC:4.6.1.1)
Adenylate/guanylate cyclase family protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YN53_9BRAD
Adenylate cyclase {ECO:0000313|EMBL:KJC38485.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
Displaying 16 items

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