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SCN18_31_3_15_R4_B_scaffold_1278

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_1278_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2..577
DNA (576bp) protein (192aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MHW8_9ACTO
SCN18_31_3_15_R4_B_scaffold_1278_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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574..1518
DNA (945bp) protein (315aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2W3_9PROT
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCN18_31_3_15_R4_B_scaffold_1278_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1518..2216
DNA (699bp) protein (233aa)
Alpha/beta hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA8_9SPHN
alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_31_3_15_R4_B_scaffold_1278_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2213..3247)
DNA (1035bp) protein (345aa)
Vitamin-B12 independent methionine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ6_9SPHN
vitamin-B12 independent methionine synthase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_31_3_15_R4_B_scaffold_1278_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3376..3921
DNA (546bp) protein (182aa)
Transcriptional regulator, MarR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GS02_SPHAL
MarR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_31_3_15_R4_B_scaffold_1278_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3927..4406)
DNA (480bp) protein (160aa)
Small subunit of phenylpropionate dioxygenase n=1 Tax=Polaromonas sp. CF318 RepID=J3D0P9_9BURK
Salicylate-5-hydroxylase small oxygenase NagH {ECO:0000313|EMBL:ETX01564.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ring hydroxylating subunit beta family protein 4
SCN18_31_3_15_R4_B_scaffold_1278_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4403..5635)
DNA (1233bp) protein (411aa)
Aromatic-ring-hydroxylating dioxygenase, alpha subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDV6_AZOL4
Salicylate 5-hydroxylase large oxygenase NagG {ECO:0000313|EMBL:ETX01563.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Aromatic-ring-hydroxylating dioxygenase, alpha subunit
SCN18_31_3_15_R4_B_scaffold_1278_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5658..6554)
DNA (897bp) protein (299aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
dapA; 4-hydroxy-tetrahydrodipicolinate synthase (EC:4.3.3.7)
Dihydrodipicolinate synthase, putative n=1 Tax=Ricinus communis RepID=B9TF72_RICCO
SCN18_31_3_15_R4_B_scaffold_1278_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6551..7660)
DNA (1110bp) protein (370aa)
Gentisate 1,2-dioxygenase n=1 Tax=Burkholderia sp. BT03 RepID=J2IJI5_9BURK
Gentisate 1 2-dioxygenase-like protein {ECO:0000313|EMBL:EZP67602.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
araC-like ligand binding domain protein
SCN18_31_3_15_R4_B_scaffold_1278_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7671..8648)
DNA (978bp) protein (326aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:GAO56621.1}; EC=4.3.1.12 {ECO:0000313|EMBL:GAO56621.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Ornithine cyclodeaminase Ocd n=1 Tax=Burkholderia terrae BS001 RepID=I5CG29_9BURK
ornithine cyclodeaminase/mu-crystallin family protein
SCN18_31_3_15_R4_B_scaffold_1278_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8648..9196)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SWY9_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:EGP47326.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1278_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9306..10439
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ1_9SPHN
Alpha/beta hydrolase {ECO:0000313|EMBL:ETR75435.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1278_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10538..12727)
DNA (2190bp) protein (730aa)
TonB-dependent receptor n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L5T7_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:KGB55146.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
TonB-dependent receptor
SCN18_31_3_15_R4_B_scaffold_1278_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12862..13524)
DNA (663bp) protein (221aa)
Carboxymuconolactone decarboxylase n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HWW8_ACHXA
carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ADP15159.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCN18_31_3_15_R4_B_scaffold_1278_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13640..14224
DNA (585bp) protein (195aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPM3_9SPHN
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_31_3_15_R4_B_scaffold_1278_16
Candidatus Caedibacter acanthamoebae_SCNPILOT_EXPT_500_P_Alphaproteobacteria_novel_39_47, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14066..14782)
DNA (717bp) protein (239aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1278_17
Candidatus Caedibacter acanthamoebae_SCNPILOT_EXPT_500_P_Alphaproteobacteria_novel_39_47, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14791..16182)
DNA (1392bp) protein (464aa)
Poly-beta-hydroxybutyrate polymerase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3J9_9PROT
phbC; poly-beta-hydroxybutyrate synthase
Poly-beta-hydroxybutyrate synthase {ECO:0000313|EMBL:BAO28343.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Displaying 17 items

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