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SCN18_31_3_15_R4_B_scaffold_1348

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_1348_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(461..1525)
DNA (1065bp) protein (355aa)
Heme A synthase {ECO:0000255|HAMAP-Rule:MF_01665}; Short=HAS {ECO:0000255|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000255|HAMAP-Rule:MF_01665};; Cytochrome aa3-controlling protein {ECO:0000255|HAMAP-Rule:MF_01665}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Heme A synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=CTAA_PARL1
cytochrome oxidase assembly
SCN18_31_3_15_R4_B_scaffold_1348_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1648..3366)
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035CA621
histone deacetylase superfamily protein
Tax=CG_Desulfarul_01
SCN18_31_3_15_R4_B_scaffold_1348_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3568..3780
DNA (213bp) protein (71aa)
Putative signal peptide protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CLD5_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ17450.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
SCN18_31_3_15_R4_B_scaffold_1348_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3777..5084)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036AE7E3
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30210.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
peptidase
SCN18_31_3_15_R4_B_scaffold_1348_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5087..7156)
DNA (2070bp) protein (690aa)
TonB dependent receptor family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1W5_BREDI
TonB dependent receptor family protein {ECO:0000313|EMBL:EGF95105.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TonB-dependent receptor
SCN18_31_3_15_R4_B_scaffold_1348_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7226..7621)
DNA (396bp) protein (132aa)
SCN18_31_3_15_R4_B_scaffold_1348_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7690..8001)
DNA (312bp) protein (104aa)
SCN18_31_3_15_R4_B_scaffold_1348_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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8263..8607
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8C5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87272.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
type IV pilus assembly PilZ
SCN18_31_3_15_R4_B_scaffold_1348_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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9000..15470
DNA (6471bp) protein (2157aa)
Putative phosphorylase, carbohydrate binding id=4564657 bin=GWF2_Methylomirabilis_70_14 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 9 items

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