ggKbase home page

SCN18_31_3_15_R4_B_scaffold_1569

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_1569_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

559..999
DNA (441bp) protein (147aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFI3_METS4
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACA14837.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_31_3_15_R4_B_scaffold_1569_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1056..2087
DNA (1032bp) protein (344aa)
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Threonine aldolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUJ8_PARL1
threonine aldolase
SCN18_31_3_15_R4_B_scaffold_1569_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2203..3231
DNA (1029bp) protein (343aa)
SCN18_31_3_15_R4_B_scaffold_1569_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3270..6584)
DNA (3315bp) protein (1105aa)
transporter n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036F5F94
Transporter {ECO:0000313|EMBL:KFD29029.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
autotransporter beta-domain-containing protein
SCN18_31_3_15_R4_B_scaffold_1569_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6876..8174
DNA (1299bp) protein (433aa)
Pentapeptide repeat protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SY18_CAUSK
Pentapeptide repeat protein {ECO:0000313|EMBL:KIF23259.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
pentapeptide repeat-containing protein
SCN18_31_3_15_R4_B_scaffold_1569_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8481..9416)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030299A2
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:GAK45710.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
lysophospholipase
SCN18_31_3_15_R4_B_scaffold_1569_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9438..9764)
DNA (327bp) protein (109aa)
sterol-binding protein n=1 Tax=gamma proteobacterium SCGC AAA300-D14 RepID=UPI000377EEA4
Marine sediment metagenome DNA, contig: S12H4_S16411 {ECO:0000313|EMBL:GAJ09841.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sterol-binding domain-containing protein
SCN18_31_3_15_R4_B_scaffold_1569_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10042..10935
DNA (894bp) protein (298aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=Q6RJM1_9BACT
Lipase/esterase {ECO:0000313|EMBL:AAS77236.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alpha/beta hydrolase domain-containing protein
SCN18_31_3_15_R4_B_scaffold_1569_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11086..11526
DNA (441bp) protein (147aa)
heat-shock protein n=1 Tax=Aureimonas ureilytica RepID=UPI000372852D
Molecular chaperone {ECO:0000313|EMBL:KHJ56135.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
heat shock protein Hsp20
SCN18_31_3_15_R4_B_scaffold_1569_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11663..12577
DNA (915bp) protein (305aa)
Lipolytic enzyme {ECO:0000313|EMBL:AFB82687.1}; EC=3.1.1.- {ECO:0000313|EMBL:AFB82687.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Lipolytic enzyme n=1 Tax=uncultured bacterium RepID=H6BDW3_9BACT
Alpha/beta hydrolase fold-3 domain protein
SCN18_31_3_15_R4_B_scaffold_1569_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12582..13259)
DNA (678bp) protein (226aa)
Glutathione S-transferase domain n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZUH4_RHILW
glutathione S-transferase domain
Glutathione S-transferase domain {ECO:0000313|EMBL:ACI54083.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
Displaying 11 items

View Taxonomy