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SCN18_31_3_15_R4_B_scaffold_972

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_972_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..826)
DNA (825bp) protein (275aa)
Oxidoreductase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y6T0_9RHOO
Oxidoreductase {ECO:0000313|EMBL:ENO87285.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
alcohol dehydrogenase
SCN18_31_3_15_R4_B_scaffold_972_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(831..1373)
DNA (543bp) protein (181aa)
Carboxymuconolactone decarboxylase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZX07_DESOH
Uncharacterized protein {ECO:0000313|EMBL:KEO92368.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
carboxymuconolactone decarboxylase
SCN18_31_3_15_R4_B_scaffold_972_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1750..4161
DNA (2412bp) protein (804aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VHZ3_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:EZP78299.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
TonB-dependent receptor
SCN18_31_3_15_R4_B_scaffold_972_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4317..5036)
DNA (720bp) protein (240aa)
TetR family transcriptional regulator n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000376544C
Uncharacterized protein {ECO:0000313|EMBL:KEO92364.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
TetR family transcriptional regulator
SCN18_31_3_15_R4_B_scaffold_972_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5062..6351)
DNA (1290bp) protein (430aa)
Linalool 8-monooxygenase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B41869
Uncharacterized protein {ECO:0000313|EMBL:KEO92363.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
Cytochrome P450 superfamily protein
SCN18_31_3_15_R4_B_scaffold_972_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6370..7140)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z5R9_9GAMM
Trehalose utilization {ECO:0000313|EMBL:KIE51676.1}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_972_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7151..7900)
DNA (750bp) protein (250aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDP54159.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDP54159.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
KR domain superfamily protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RT46_9GAMM
short-chain dehydrogenase/reductase SDR
SCN18_31_3_15_R4_B_scaffold_972_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7903..8664)
DNA (762bp) protein (254aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RT78_9GAMM
putative oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCN18_31_3_15_R4_B_scaffold_972_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8683..10038)
DNA (1356bp) protein (452aa)
MFS transporter n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H6D1_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:KEO92365.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
major facilitator superfamily transporter
SCN18_31_3_15_R4_B_scaffold_972_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10317..11282
DNA (966bp) protein (322aa)
ABC transporter substrate-binding protein n=1 Tax=Acinetobacter nosocomialis M2 RepID=V6INF4_9GAMM
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEO92360.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit
SCN18_31_3_15_R4_B_scaffold_972_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11306..12343
DNA (1038bp) protein (346aa)
Transketolase central region n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTP1_HYPDA
Pyruvate dehydrogenase {ECO:0000313|EMBL:KEO92359.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
pdhB; pyruvate dehydrogenase E1 component subunit beta
SCN18_31_3_15_R4_B_scaffold_972_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12348..13460
DNA (1113bp) protein (371aa)
Alpha/beta hydrolase fold n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZD00_GLUDA
Acetoin dehydrogenase {ECO:0000313|EMBL:KGM34641.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
branched-chain alpha-keto acid dehydrogenase subunit E2
SCN18_31_3_15_R4_B_scaffold_972_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13697..15082
DNA (1386bp) protein (462aa)
(2Fe-2S)-binding protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B75F13
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:CCA90176.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCN18_31_3_15_R4_B_scaffold_972_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15083..15844
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQJ9_PARL1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABS62182.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_31_3_15_R4_B_scaffold_972_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15883..16887
DNA (1005bp) protein (335aa)
UPI0003CFF6F4 related cluster n=1 Tax=unknown RepID=UPI0003CFF6F4
NADP-dependent oxidoreductase {ECO:0000313|EMBL:ESZ86621.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_972_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17766..19055)
DNA (1290bp) protein (430aa)
PREDICTED: sodium-dependent glucose transporter 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15CB3
Uncharacterized protein {ECO:0000313|EMBL:EYF06192.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
glucose/galactose transporter
SCN18_31_3_15_R4_B_scaffold_972_17
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19080..20045)
DNA (966bp) protein (322aa)
Glucokinase {ECO:0000256|HAMAP-Rule:MF_00524}; EC=2.7.1.2 {ECO:0000256|HAMAP-Rule:MF_00524};; Glucose kinase {ECO:0000256|HAMAP-Rule:MF_00524}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSY3_PSEUU
SCN18_31_3_15_R4_B_scaffold_972_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20120..21187)
DNA (1068bp) protein (356aa)
PREDICTED: uncharacterized protein LOC102317426 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11E76
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADG09871.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
Displaying 18 items

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