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SCN18_31_3_15_R4_B_scaffold_203

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Displaying items 1-30 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_203_1
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..2138)
DNA (2136bp) protein (712aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z051_FLABF
putative adhesin
Uncharacterized protein {ECO:0000313|EMBL:CCB70347.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCN18_31_3_15_R4_B_scaffold_203_2
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2285..3184
DNA (900bp) protein (300aa)
Thioredoxin-related protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6STK0_9FLAO
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KGO89849.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
NifU domain-containing protein
SCN18_31_3_15_R4_B_scaffold_203_3
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3261..3461
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S016_9FLAO
Dodecin {ECO:0000313|EMBL:KGO89848.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_203_4
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3503..5527
DNA (2025bp) protein (675aa)
YyaL protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S6Q8_9FLAO
YyaL protein {ECO:0000313|EMBL:ESU20075.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
thioredoxin
SCN18_31_3_15_R4_B_scaffold_203_5
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5540..6310
DNA (771bp) protein (257aa)
Mechanosensitive ion channel MscS n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SU44_9FLAO
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:ESU27965.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
mechanosensitive ion channel MscS
SCN18_31_3_15_R4_B_scaffold_203_6
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6300..6974)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMV2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27966.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
peptidase M22, glycoprotease
SCN18_31_3_15_R4_B_scaffold_203_7
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7110..8426)
DNA (1317bp) protein (439aa)
Putative membrane fusion efflux protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6STK4_9FLAO
Putative membrane fusion efflux protein {ECO:0000313|EMBL:ESU29512.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
membrane fusion efflux protein
SCN18_31_3_15_R4_B_scaffold_203_8
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8433..9866)
DNA (1434bp) protein (478aa)
Outer membrane efflux protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SML9_9FLAO
Outer membrane efflux protein {ECO:0000313|EMBL:ESU27968.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
transporter
SCN18_31_3_15_R4_B_scaffold_203_9
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10011..11402
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SSS8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU29514.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
lipoprotein precursor
SCN18_31_3_15_R4_B_scaffold_203_10
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11456..11731)
DNA (276bp) protein (92aa)
Putative uncharacterized protein id=2493781 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF1_Flavobacteria_32_7_curated
SCN18_31_3_15_R4_B_scaffold_203_11
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11721..12260)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S049_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU20068.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_203_12
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12266..12892)
DNA (627bp) protein (209aa)
Photosynthetic protein synthase II {ECO:0000313|EMBL:KGO94088.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
Putative uncharacterized protein id=2493786 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
ypmQ; cytochrome c oxidase biogenesis protein YpmQ
SCN18_31_3_15_R4_B_scaffold_203_13
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12958..13608)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6STL0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU29517.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_203_14
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13689..13925)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000364FC8C
Cytochrome C oxidase subunit IV {ECO:0000313|EMBL:KGO96564.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_203_15
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14059..15036)
DNA (978bp) protein (326aa)
Cytochrome c oxidase family protein {ECO:0000313|EMBL:ESU20065.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ESU20065.1};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
Cytochrome c oxidase family protein (EC:1.9.3.-)
Cytochrome c oxidase family protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S6P7_9FLAO
SCN18_31_3_15_R4_B_scaffold_203_16
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15081..15662)
DNA (582bp) protein (194aa)
Alternative cytochrome c oxidase polypeptide CoxO {ECO:0000313|EMBL:ESU29519.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ESU29519.1};; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
ctaE; Cytochrome c oxidase, subunit III (EC:1.9.3.1)
Alternative cytochrome c oxidase polypeptide CoxO n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SST3_9FLAO
SCN18_31_3_15_R4_B_scaffold_203_17
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15667..16617)
DNA (951bp) protein (317aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
cyoE; Protoheme IX farnesyltransferase (EC:2.5.1.-)
Polyprenyltransferase (Cytochrome oxidase assembly factor) n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S044_9FLAO
SCN18_31_3_15_R4_B_scaffold_203_18
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16729..17271)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMW3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27976.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_203_19
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17315..19414)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J465_9FLAO
Gliding motility protein RemB {ECO:0000313|EMBL:KGO89832.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
gliding motility protein RemB
SCN18_31_3_15_R4_B_scaffold_203_20
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19427..20194)
DNA (768bp) protein (256aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S6P2_9FLAO
SCN18_31_3_15_R4_B_scaffold_203_21
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20219..20599)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SNF6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO96571.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
teicoplanin resistance protein VanZ
SCN18_31_3_15_R4_B_scaffold_203_22
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20592..20972)
DNA (381bp) protein (127aa)
Glycine cleavage system H protein id=4401714 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
gcvH; glycine cleavage system H protein
SCN18_31_3_15_R4_B_scaffold_203_23
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21034..28278)
DNA (7245bp) protein (2415aa)
Gliding motility-related protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMX0_9FLAO
SprA protein {ECO:0000313|EMBL:KGO89829.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
sprA; SprA protein
SCN18_31_3_15_R4_B_scaffold_203_24
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28282..28863)
DNA (582bp) protein (194aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
Holliday junction DNA helicase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZZ9_9FLAO
ruvA; Holliday junction DNA helicase RuvA
SCN18_31_3_15_R4_B_scaffold_203_25
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28956..31247)
DNA (2292bp) protein (764aa)
Malic enzyme {ECO:0000313|EMBL:KGO89827.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KGO89827.1};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
malic enzyme (EC:1.1.1.40)
Bifunctional protein: malate dehydrogenase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SS43_9FLAO
SCN18_31_3_15_R4_B_scaffold_203_26
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31398..32237)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VLK7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF19644.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_203_27
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32382..33308)
DNA (927bp) protein (309aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
Epoxyqueuosine reductase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J453_9FLAO
epoxyqueuosine reductase
SCN18_31_3_15_R4_B_scaffold_203_28
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33313..34335)
DNA (1023bp) protein (341aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=RUVB_FLAPJ
SCN18_31_3_15_R4_B_scaffold_203_29
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34401..34685)
DNA (285bp) protein (95aa)
Acetyltransferase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSR9_PEDHD
Contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIO79039.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
putative acetyltransferase
SCN18_31_3_15_R4_B_scaffold_203_30
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34678..34908)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S196_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU20047.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
Displaying items 1-30 of 182 in total

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