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SCN18_31_3_15_R4_B_scaffold_828

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_828_1
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..174
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWA4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIX22432.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_828_2
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

178..1176
DNA (999bp) protein (333aa)
Bacteroidetes-specific putative membrane protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S058_9FLAO
Membrane protein {ECO:0000313|EMBL:KGO79578.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_828_3
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1237..1746
DNA (510bp) protein (170aa)
Carbonic anhydrase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S106_9FLAO
Acetyltransferase {ECO:0000313|EMBL:KGO88849.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily
SCN18_31_3_15_R4_B_scaffold_828_4
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1799..2011)
DNA (213bp) protein (71aa)
SCN18_31_3_15_R4_B_scaffold_828_5
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2239..2505)
DNA (267bp) protein (89aa)
SCN18_31_3_15_R4_B_scaffold_828_6
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2545..2790)
DNA (246bp) protein (82aa)
SCN18_31_3_15_R4_B_scaffold_828_7
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3267..4151)
DNA (885bp) protein (295aa)
Lantibiotic biosynthesis protein n=1 Tax=Kordia algicida OT-1 RepID=A9DQ68_9FLAO
Lantibiotic biosynthesis protein {ECO:0000313|EMBL:EDP96587.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
lantibiotic dehydratase
SCN18_31_3_15_R4_B_scaffold_828_8
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4144..6369)
DNA (2226bp) protein (742aa)
Lantibiotic biosynthesis protein n=1 Tax=Kordia algicida OT-1 RepID=A9DQ66_9FLAO
Lantibiotic biosynthesis protein {ECO:0000313|EMBL:EDP96586.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
Lantibiotic dehydratase domain-containing protein
SCN18_31_3_15_R4_B_scaffold_828_9
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6374..7585)
DNA (1212bp) protein (404aa)
Lantibiotic biosynthesis protein n=1 Tax=Kordia algicida OT-1 RepID=A9DQ65_9FLAO
Lantibiotic biosynthesis protein {ECO:0000313|EMBL:EDP96585.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
nisC; Nisin biosynthesis protein NisC
SCN18_31_3_15_R4_B_scaffold_828_10
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7808..8617)
DNA (810bp) protein (270aa)
Glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
MurI protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S6R3_9FLAO
SCN18_31_3_15_R4_B_scaffold_828_11
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8653..9165)
DNA (513bp) protein (171aa)
Cationic outer membrane protein OmpH n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9W2_9FLAO
Membrane protein {ECO:0000313|EMBL:KGO96546.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
outer membrane chaperone Skp
SCN18_31_3_15_R4_B_scaffold_828_12
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9183..10385)
DNA (1203bp) protein (401aa)
Outer membrane protein, ompH family n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SFP2_9FLAO
Membrane protein {ECO:0000313|EMBL:KGO88846.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
outer membrane chaperone Skp
SCN18_31_3_15_R4_B_scaffold_828_13
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10430..13138)
DNA (2709bp) protein (903aa)
Putative outer membrane protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S062_9FLAO
Putative outer membrane protein {ECO:0000313|EMBL:ESU20083.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
bamA; Outer membrane protein assembly complex precursor, BamA
SCN18_31_3_15_R4_B_scaffold_828_14
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13110..13850)
DNA (741bp) protein (247aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
Undecaprenyl pyrophosphate synthase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SYK3_9FLAO
undecaprenyl pyrophosphate synthase
SCN18_31_3_15_R4_B_scaffold_828_15
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13855..14538)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SSQ9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU29499.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_828_16
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14692..15576)
DNA (885bp) protein (295aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
Inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMK7_9FLAO
NAD+ kinase
SCN18_31_3_15_R4_B_scaffold_828_17
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15600..16259)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S1D0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU20087.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_828_18
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16354..17067
DNA (714bp) protein (238aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
Pyridoxal phosphate biosynthetic protein PdxJ n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S066_9FLAO
pdxJ; Pyridoxal phosphate biosynthetic protein PdxJ
SCN18_31_3_15_R4_B_scaffold_828_19
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17067..17834
DNA (768bp) protein (256aa)
alpha/beta hydrolase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003486C49
Strain DSM 12611 Contig08, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53037.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
alpha/beta hydrolase
SCN18_31_3_15_R4_B_scaffold_828_20
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17980..19233
DNA (1254bp) protein (418aa)
Long-chain fatty acid transport protein, outer membrane protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S6S6_9FLAO
Transporter {ECO:0000313|EMBL:KGO88838.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
outer membrane protein precursor
SCN18_31_3_15_R4_B_scaffold_828_21
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19252..20829
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S029_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU20091.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
lipoprotein precursor
SCN18_31_3_15_R4_B_scaffold_828_22
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20914..21252
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SNY6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27947.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
membrane protein
SCN18_31_3_15_R4_B_scaffold_828_23
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21379..22704
DNA (1326bp) protein (442aa)
Trigger factor (TF) n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9C3_9FLAO
Peptidylprolyl isomerase {ECO:0000313|EMBL:KGO88835.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
tig; Trigger factor (TF)
SCN18_31_3_15_R4_B_scaffold_828_24
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22788..23447
DNA (660bp) protein (220aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=883155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides [odoratimimus] CIP 103059.;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Myroides RepID=H1Z5Z5_MYROD
ATP-dependent Clp protease, protease subunit
SCN18_31_3_15_R4_B_scaffold_828_25
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23465..24733
DNA (1269bp) protein (423aa)
ClpX protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S6T1_9FLAO
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
SCN18_31_3_15_R4_B_scaffold_828_26
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24836..25060)
DNA (225bp) protein (75aa)
hypothetical protein, partial n=1 Tax=Flavobacterium rivuli RepID=UPI00036C8FDB
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:KGO84653.1}; Flags: Fragment;; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
outer membrane protein precursor, OmpA family
Displaying 26 items

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