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SCN18_31_3_15_R5_B_scaffold_5

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Displaying items 1-30 of 847 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R5_B_scaffold_5_1
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1037)
DNA (1035bp) protein (345aa)
YD repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKL6_CHIPD
hypothetical protein
YD repeat protein {ECO:0000313|EMBL:ACU62082.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_31_3_15_R5_B_scaffold_5_2
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1061..2395)
DNA (1335bp) protein (445aa)
Fibronectin type iii domain protein n=1 Tax=Galbibacter marinus RepID=K2PQT5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF74822.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
SCN18_31_3_15_R5_B_scaffold_5_3
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2436..6029)
DNA (3594bp) protein (1198aa)
YD repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF98_CHIPD">RepID=C7PF98_CHIPD
hypothetical protein
YD repeat protein {ECO:0000313|EMBL:ACU61603.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_31_3_15_R5_B_scaffold_5_4
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6054..7487)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA67_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03405.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_31_3_15_R5_B_scaffold_5_5
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7686..8039)
DNA (354bp) protein (118aa)
Transcriptional regulator, HxlR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W660_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:ETZ23643.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
HxlR family transcriptional regulator
SCN18_31_3_15_R5_B_scaffold_5_6
Mucilaginibacter paludis_SCNPILOT_CONT_1000_P_Mucilaginibacter_44_25, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8234..8728
DNA (495bp) protein (165aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBI9_CHIPD
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU63053.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_31_3_15_R5_B_scaffold_5_7
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8816..10345
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDZ1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02625.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_31_3_15_R5_B_scaffold_5_8
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10485..12260
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00035EEAD8
Uncharacterized protein {ECO:0000313|EMBL:EMR04655.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein
SCN18_31_3_15_R5_B_scaffold_5_9
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12277..13110
DNA (834bp) protein (278aa)
Metallophosphoesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7U9_NIAKG
metallophosphoesterase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCN18_31_3_15_R5_B_scaffold_5_10
SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, Bacteroidetes, Bacteria

Not on your lists

comp(13094..13414)
DNA (321bp) protein (107aa)
Peptidase S24/S26A/S26B, conserved region n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRL8_NIAKG
Peptidase S24/S26A/S26B, conserved region
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:AEW02165.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_31_3_15_R5_B_scaffold_5_11
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13692..14510
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D189B
Transcriptional regulator {ECO:0000313|EMBL:KIC94243.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
btr_6; HTH-type transcriptional activator Btr
SCN18_31_3_15_R5_B_scaffold_5_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14611..15573
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037126EB
Uncharacterized protein {ECO:0000313|EMBL:KIC94244.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative S15 family serine protease
SCN18_31_3_15_R5_B_scaffold_5_13
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15593..16234
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376C02B
NAD-dependent dehydratase {ECO:0000313|EMBL:KIC94245.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
NAD-dependent epimerase/dehydratase
SCN18_31_3_15_R5_B_scaffold_5_14
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16350..17117
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V4L7_TERSS
Uncharacterized protein {ECO:0000313|EMBL:KIC95945.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCN18_31_3_15_R5_B_scaffold_5_15
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17170..18063
DNA (894bp) protein (298aa)
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7Z5_NIAKG
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AKD58266.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCN18_31_3_15_R5_B_scaffold_5_16
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18154..19080)
DNA (927bp) protein (309aa)
Beta-lactamase {ECO:0000313|EMBL:ACU62014.1}; EC=3.5.2.6 {ECO:0000313|EMBL:ACU62014.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Beta-lactamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJE6_CHIPD
beta-lactamase
SCN18_31_3_15_R5_B_scaffold_5_17
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19188..19622)
DNA (435bp) protein (145aa)
serine peptidase (EC:3.4.21.-)
Beta-lactamase class C penicillin binding protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JPP5_9BACT
Beta-lactamase class C penicillin binding protein {ECO:0000313|EMBL:ELR70790.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
SCN18_31_3_15_R5_B_scaffold_5_18
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19625..20416)
DNA (792bp) protein (264aa)
Beta-lactamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLF6_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91586.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
beta-lactamase
SCN18_31_3_15_R5_B_scaffold_5_19
unknown

Not on your lists

comp(20578..20982)
DNA (405bp) protein (135aa)

This feature has no annotations

SCN18_31_3_15_R5_B_scaffold_5_20
unknown

Not on your lists

21342..21458
DNA (117bp) protein (39aa)

This feature has no annotations

SCN18_31_3_15_R5_B_scaffold_5_trna_6
unknown

Not on your lists

comp(21642..21714)
DNA (73bp)
transferRNA Phe
SCN18_31_3_15_R5_B_scaffold_5_21
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21969..22754
DNA (786bp) protein (262aa)
Putative proline hydroxylase n=1 Tax=Moorea producens 3L RepID=F4XX15_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETZ24495.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCN18_31_3_15_R5_B_scaffold_5_22
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22754..23467
DNA (714bp) protein (238aa)
Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQB9_CHIPD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACU58808.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_31_3_15_R5_B_scaffold_5_23
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23529..23921
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003646A80
Uncharacterized protein {ECO:0000313|EMBL:KDN54535.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_31_3_15_R5_B_scaffold_5_24
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23928..26204)
DNA (2277bp) protein (759aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDZ7_NIAKG
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KIC96524.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ATP-dependent DNA helicase RecQ
SCN18_31_3_15_R5_B_scaffold_5_25
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26607..27575
DNA (969bp) protein (323aa)
KpsF/GutQ family protein {ECO:0000313|EMBL:AEW02632.1}; EC=5.3.1.13 {ECO:0000313|EMBL:AEW02632.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
KpsF/GutQ family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDZ8_NIAKG
KpsF/GutQ family protein
SCN18_31_3_15_R5_B_scaffold_5_26
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27584..28666
DNA (1083bp) protein (361aa)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE00_NIAKG
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KIC96377.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
mannose-1-phosphate guanylyltransferase
SCN18_31_3_15_R5_B_scaffold_5_27
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28690..29409
DNA (720bp) protein (240aa)
3''''-5'''' exonuclease n=1 Tax=Niabella aurantiaca RepID=UPI00036E018A
3'-5' exonuclease
3'-5' exonuclease {ECO:0000313|EMBL:AHF16164.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_31_3_15_R5_B_scaffold_5_28
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29423..30577
DNA (1155bp) protein (385aa)
2-keto-4-methylthiobutyrate aminotransferase apoenzyme {ECO:0000313|EMBL:AEW02637.1}; EC=2.6.1.- {ECO:0000313|EMBL:AEW02637.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
2-keto-4-methylthiobutyrate aminotransferase apoenzyme n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF17_NIAKG
2-keto-4-methylthiobutyrate aminotransferase
SCN18_31_3_15_R5_B_scaffold_5_29
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

30581..31882
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035CBA1D
NHL repeat-containing protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
Displaying items 1-30 of 847 in total

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