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scnpilot_p_inoc_sub60_scaffold_111_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_111_curated_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269..1564)
DNA (1296bp) protein (432aa)
Conjugal transfer mating pair stabilization protein TraN id=1311309 bin=GWE1_T_denit_62_9 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
traN; conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1561..2646)
DNA (1086bp) protein (362aa)
hypothetical protein id=1311308 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2643..3347)
DNA (705bp) protein (235aa)
hypothetical protein id=1311307 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3351..4361)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0D03
hypothetical protein; K12060 conjugal transfer pilus assembly protein TraU
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4358..4498)
DNA (141bp) protein (47aa)
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4540..5163)
DNA (624bp) protein (208aa)
Membrane lipoprotein lipid attachment site id=1311305 bin=GWE1_T_denit_62_9 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
membrane lipoprotein lipid attachment site; K12061 conjugal transfer pilus assembly protein TraW
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5165..5710)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FC893
hypothetical protein; K12062 conjugal transfer pilin signal peptidase TrbI
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5707..6189)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C7A3E
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6186..8762)
DNA (2577bp) protein (859aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A36F8
protein TraC; K12063 conjugal transfer ATP-binding protein TraC
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8759..9319)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037289E4
type IV conjugative transfer system protein TraV; K12064 conjugal transfer pilus assembly protein TraV
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9316..10185)
DNA (870bp) protein (290aa)
protein-disulfide isomerase; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036ABC56
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10191..11393)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367097D
protein TraB; K12065 conjugal transfer pilus assembly protein TraB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11447..12172)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374CB65
hypothetical protein; K12066 conjugal transfer pilus assembly protein TraK
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12135..12725)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003711550
type IV conjugative transfer system protein TraE; K12067 conjugal transfer pilus assembly protein TraE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12725..13015)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BB3F6
protein TraL; K12068 conjugal transfer pilus assembly protein TraL
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13041..13358)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E0D72
TraA protein; K12069 conjugal transfer pilus assembly protein TraA
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_111_curated_17
unknown

Not on your lists

comp(13396..13635)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379F8B0
Displaying 17 items

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