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scnpilot_p_inoc_sub60_scaffold_1_curated

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_1_curated_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1203)
DNA (1203bp) protein (401aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037606E2
scnpilot_p_inoc_sub60_scaffold_1_curated_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1289..4399)
DNA (3111bp) protein (1037aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036080D9
heavy metal efflux pump CzcA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AAZ96855.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4419..5666)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036588F9
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AAZ96854.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5656..6513)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372D903
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96853.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6843..9050)
DNA (2208bp) protein (736aa)
diguanylate cyclase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E534D
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9072..11045)
DNA (1974bp) protein (658aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361E94F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11230..12168
DNA (939bp) protein (313aa)
D-alanyl-D-alanine carboxypeptidase-like protein; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000377D22E
D-alanyl-D-alanine carboxypeptidase-like protein {ECO:0000313|EMBL:AAZ96036.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12213..13169
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003661CE9
hypothetical protein; K07088
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13166..14050
DNA (885bp) protein (295aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:AAZ96034.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AAZ96034.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
tartronate semialdehyde reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00035CEDA4
scnpilot_p_inoc_sub60_scaffold_1_curated_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14135..14806)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B9A36
Crp/FNR family transcriptional regulator
Transcriptional Regulator, Crp/Fnr family {ECO:0000313|EMBL:AAZ96032.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14971..16758
DNA (1788bp) protein (596aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003713727
regulator of nitric oxide reductase transcription
Regulator of nitric oxide reductase transcription {ECO:0000313|EMBL:AAZ96031.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16840..18570
DNA (1731bp) protein (577aa)
Nitrite reductase (NO-forming) {ECO:0000313|EMBL:AAZ96030.1}; EC=1.7.2.1 {ECO:0000313|EMBL:AAZ96030.1};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
nitrite reductase (EC:1.7.2.1); K15864 nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
Nitrite reductase (NO-forming) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML5_THIDA
scnpilot_p_inoc_sub60_scaffold_1_curated_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18631..18963
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML6_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96029.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18953..20128
DNA (1176bp) protein (392aa)
Heme d1 biosynthesis protein NirF n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML7_THIDA
heme d1 biosynthesis protein NirF
Heme d1 biosynthesis protein NirF {ECO:0000313|EMBL:AAZ96028.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20125..21135
DNA (1011bp) protein (337aa)
Possible Transcriptional Regulator, AsnC family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF33_THIDA
AsnC family transcriptional regulator
Possible Transcriptional Regulator, AsnC family {ECO:0000313|EMBL:AAZ96027.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21135..21578
DNA (444bp) protein (148aa)
Possible Transcriptional Regulator, AsnC family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF34_THIDA
AsnC family transcriptional regulator
Possible Transcriptional Regulator, AsnC family {ECO:0000313|EMBL:AAZ96026.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21575..22075
DNA (501bp) protein (167aa)
Possible Transcriptional Regulator, AsnC family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML8_THIDA
AsnC family transcriptional regulator
Possible Transcriptional Regulator, AsnC family {ECO:0000313|EMBL:AAZ96025.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22086..23285
DNA (1200bp) protein (400aa)
Elongator protein 3/MiaB/NifB n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML9_THIDA
Elongator protein 3/MiaB/NifB
Elongator protein 3/MiaB/NifB {ECO:0000313|EMBL:AAZ96024.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_1_curated_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23285..24838
DNA (1554bp) protein (518aa)
nitrite reductase (EC:1.7.2.1); K15864 nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
Nitrite reductase (NO-forming) {ECO:0000313|EMBL:AAZ96023.1}; EC=1.7.2.1 {ECO:0000313|EMBL:AAZ96023.1};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Nitrite reductase (NO-forming) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMM0_THIDA
scnpilot_p_inoc_sub60_scaffold_1_curated_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24980..26434
DNA (1455bp) protein (485aa)
gabD; succinate-semialdehyde dehydrogenase [NAD(P)] (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E49DA
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26431..27339
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003816777
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_22
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27343..28704)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003738CF3
rhodanese
Tax=RBG_16_Betaproteobacteria_58_11_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28747..29385)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D9174
metallo-beta-lactamase superfamily protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29416..30051
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B1D4F
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30161..30577
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372DD73
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30638..31537
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036513D6
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31640..32314
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E2303
putative cytochrome c
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32379..32735)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000364114A
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32732..33997)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003679405
lytic murein transglycosylase
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_1_curated_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33990..35699)
DNA (1710bp) protein (570aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
asparagine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037113F4
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 96 in total

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