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scnpilot_p_inoc_sub60_scaffold_219_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_219_curated_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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119..2362
DNA (2244bp) protein (748aa)
Lysine decarboxylase {ECO:0000313|EMBL:AAZ98059.1}; EC=4.1.1.18 {ECO:0000313|EMBL:AAZ98059.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ornithine decarboxylase (EC:4.1.1.17); K01584 arginine decarboxylase [EC:4.1.1.19]
lysine decarboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B1940
scnpilot_p_inoc_sub60_scaffold_219_curated_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2500..2883
DNA (384bp) protein (128aa)
30S ribosomal protein S6 id=1355428 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_219_curated_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2888..3178
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365C3E5
restart primosome assembly protein PriB; K02686 primosomal replication protein N
Primosomal replication protein n {ECO:0000256|SAAS:SAAS00194886}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_219_curated_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3182..3469
DNA (288bp) protein (96aa)
30S ribosomal protein S18 n=1 Tax=Thiobacillus denitrificans RepID=UPI000378C76E
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_219_curated_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3480..3929
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=1 Tax=Thiobacillus thioparus RepID=UPI000369CCDB
50S ribosomal protein L9P; K02939 large subunit ribosomal protein L9
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_219_curated_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4065..5456
DNA (1392bp) protein (464aa)
primary replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12]
DnaB helicase id=1355425 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_219_curated_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5463..6530
DNA (1068bp) protein (356aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
alanine racemase n=1 Tax=Thiobacillus denitrificans RepID=UPI000360242B
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_219_curated_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6866..7903)
DNA (1038bp) protein (346aa)
glycine cleavage system protein T n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D3844
glycine cleavage T-protein (aminomethyl transferase); K06980
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_219_curated_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7943..8374
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000380E4EA
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_219_curated_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8310..9935)
DNA (1626bp) protein (542aa)
L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase n=1 Tax=Thiobacillus denitrificans RepID=UPI000366608D
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_219_curated_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9988..10671
DNA (684bp) protein (228aa)
RNA polymerase sigma factor RpoE n=1 Tax=Thiobacillus thioparus RepID=UPI00036658E7
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_219_curated_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10674..11138
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DD6AF
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 12 items

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