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SCNpilot_cont_1000_bf_scaffold_8643

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_8643_1
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..106)
DNA (105bp) protein (35aa)
30S ribosomal protein S3 n=2 Tax=Brucella RepID=C9TLA0_9RHIZ
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_1000_bf_scaffold_8643_2
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(106..495)
DNA (390bp) protein (130aa)
50S ribosomal protein L22 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N2E7_9RHIZ
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
SCNpilot_cont_1000_bf_scaffold_8643_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(498..776)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C2BBB
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ribosomal protein S19, bacterial/organelle
SCNpilot_cont_1000_bf_scaffold_8643_4
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(792..1625)
DNA (834bp) protein (278aa)
PREDICTED: 60S ribosomal protein L2, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10DD3
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_1000_bf_scaffold_8643_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1645..1938)
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FD783
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
50S ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23
SCNpilot_cont_1000_bf_scaffold_8643_6
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1935..2555)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDU0_MESOW
50S ribosomal protein L4/L1e; K02926 large subunit ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_cont_1000_bf_scaffold_8643_7
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2555..3277)
DNA (723bp) protein (241aa)
50S ribosomal protein L3 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=RL3_MESSB rbh
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 rbh
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_1000_bf_scaffold_8643_8
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3385..3657)
DNA (273bp) protein (91aa)
30S ribosomal protein S10 n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G7H6_9RHIZ
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
Displaying 8 items

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