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SCNpilot_cont_1000_bf_scaffold_1029

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1029_1
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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156..1775
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003652F85 rbh
Plasmid replication initiator-like protein {ECO:0000313|EMBL:KJS18634.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
plasmid replication initiator protein-like protein; K07497 putative transposase rbh
SCNpilot_cont_1000_bf_scaffold_1029_2
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1765..2649
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DCC1E rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS14429.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_1029_3
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2646..3671
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003796778 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS14430.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1029_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3867..4676
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D8429 rbh
HYPOTHETICAL CONSERVED PROTEIN {ECO:0000313|EMBL:CAD31506.1}; TaxID=381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (Mesorhizobium loti).;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_1029_5
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4679..5428
DNA (750bp) protein (250aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AK1_MESSB rbh
putative transcriptional regulator rbh
Putative transcriptional regulator {ECO:0000313|EMBL:ABG65574.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_1000_bf_scaffold_1029_6
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5784..7685
DNA (1902bp) protein (634aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWR4_9RHIZ rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CDN58090.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
extracellular solute-binding protein family 5; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_1029_7
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7772..8779
DNA (1008bp) protein (336aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWR5_9RHIZ rbh
ABC transporter permease {ECO:0000313|EMBL:KGD96637.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_cont_1000_bf_scaffold_1029_8
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8776..9636
DNA (861bp) protein (287aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWR6_9RHIZ rbh
Peptide ABC transporter {ECO:0000313|EMBL:KGD96638.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_1000_bf_scaffold_1029_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9636..10706
DNA (1071bp) protein (357aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPX9_9RHIZ rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:CDN58093.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_1029_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10703..11605
DNA (903bp) protein (301aa)
ABC transporter-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPX8_9RHIZ rbh
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:CDN58094.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
ABC transporter-like protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_1029_11
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11648..13198
DNA (1551bp) protein (517aa)
Alpha-N-arabinofuranosidase (EC:3.2.1.55); K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55] rbh
Alpha-L-arabinofuranosidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWR9_9RHIZ rbh
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:KGD96639.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_1000_bf_scaffold_1029_12
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13223..14152)
DNA (930bp) protein (310aa)
Putative DNA-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPY4_9RHIZ rbh
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDN58096.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
celI; transcriptional regulator protein
SCNpilot_cont_1000_bf_scaffold_1029_13
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15067..15576)
DNA (510bp) protein (170aa)
Hsp20/alpha crystallin family protein n=2 Tax=Ochrobactrum intermedium RepID=C4WQV8_9RHIZ
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDX27839.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
molecular chaperone small heat shock protein, hsp20 family; K13993 HSP20 family protein
SCNpilot_cont_1000_bf_scaffold_1029_14
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15675..16214)
DNA (540bp) protein (180aa)
Small heat shock protein hspD n=3 Tax=Ochrobactrum intermedium RepID=C4WQV9_9RHIZ
Small heat shock protein hspD {ECO:0000313|EMBL:EEQ94618.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hspB2; small heat shock protein HspB; K04080 molecular chaperone IbpA
SCNpilot_cont_1000_bf_scaffold_1029_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16376..16594
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035D8E23
hypothetical protein
Msr2388 protein {ECO:0000313|EMBL:BAB49532.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_1029_16
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16724..17056
DNA (333bp) protein (111aa)
UPI0003CE9EC7 related cluster n=1 Tax=unknown RepID=UPI0003CE9EC7
Uncharacterized protein {ECO:0000313|EMBL:ESY74199.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1029_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17040..17315)
DNA (276bp) protein (92aa)
UPI0003D06AEA related cluster n=1 Tax=unknown RepID=UPI0003D06AEA
Protein usg {ECO:0000313|EMBL:EZQ14103.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1029_18
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17337..17681)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2MZW0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX22203.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1029_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18018..18332
DNA (315bp) protein (105aa)
10 kDa chaperonin 2 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=CH102_RHILO
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
groES; co-chaperonin GroES; K04078 chaperonin GroES
SCNpilot_cont_1000_bf_scaffold_1029_20
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18550..19839
DNA (1290bp) protein (430aa)
60 kDa chaperonin n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBW1_MESCW
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
chaperonin GroEL; K04077 chaperonin GroEL
SCNpilot_cont_1000_bf_scaffold_1029_21
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19909..20133
DNA (225bp) protein (75aa)
UPI0003CE176C related cluster n=1 Tax=unknown RepID=UPI0003CE176C
Uncharacterized protein {ECO:0000313|EMBL:ESY70153.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1029_22
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20559..20855
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJM7_MESAW
Protein of unknown function (DUF982)
Uncharacterized protein {ECO:0000313|EMBL:AGB45542.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_1029_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20964..22856
DNA (1893bp) protein (631aa)
heat shock protein Hsp90 n=1 Tax=Rhizobium loti RepID=UPI00035DF295
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
heat shock protein 90; K04079 molecular chaperone HtpG
SCNpilot_cont_1000_bf_scaffold_1029_24
unknown

Not on your lists

comp(23360..23647)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1029_25
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23902..24141
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDF6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV15277.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1029_26
unknown

Not on your lists

24364..24603
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1029_27
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24686..25117)
DNA (432bp) protein (144aa)
Membrane protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H613_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESW89650.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1029_28
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25258..25752
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X824_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS17378.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_1000_bf_scaffold_1029_29
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26100..27128
DNA (1029bp) protein (343aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KIN5_9RHIZ rbh
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:EMG55025.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
transposase of ISMdi12, IS110 family
Displaying 29 items

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