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SCNpilot_cont_1000_bf_scaffold_1043

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1043_1
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1481)
DNA (1479bp) protein (493aa)
putative acetyl-CoA synthetase (CoA-binding domain) (EC:6.2.1.13)
Uncharacterized protein {ECO:0000313|EMBL:KEI45722.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
CoA-binding domain protein id=2062474 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
SCNpilot_cont_1000_bf_scaffold_1043_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1527..2633)
DNA (1107bp) protein (369aa)
2-nitropropane dioxygenase n=1 Tax=Henriciella marina RepID=UPI000366AC4B
2-nitropropane dioxygenase NPD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_cont_1000_bf_scaffold_1043_3
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2683..3780)
DNA (1098bp) protein (366aa)
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YVH4_9MICO
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_cont_1000_bf_scaffold_1043_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3972..5462)
DNA (1491bp) protein (497aa)
Tricarballylate dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K4Q1_9PROT rbh
Tricarballylate dehydrogenase {ECO:0000313|EMBL:EKE72460.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
tricarballylate dehydrogenase
SCNpilot_cont_1000_bf_scaffold_1043_5
unknown

Not on your lists

comp(5669..6103)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1043_6
unknown

Not on your lists

6339..6551
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1043_7
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7909..9204)
DNA (1296bp) protein (432aa)
hydroxymethylpyrimidine transporter n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000382963D rbh
Hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:EUC17424.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
hydroxymethylpyrimidine transporter CytX rbh
SCNpilot_cont_1000_bf_scaffold_1043_8
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9350..9835)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:357 RepID=R7CM11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79056.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_1043_9
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9832..10659)
DNA (828bp) protein (276aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003461059
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:AFM28129.1}; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
SCNpilot_cont_1000_bf_scaffold_1043_10
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10656..11342)
DNA (687bp) protein (229aa)
amino acid ABC transporter n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B7473 rbh
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCNpilot_cont_1000_bf_scaffold_1043_11
unknown

Not on your lists

comp(11284..11382)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1043_12
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11379..12263)
DNA (885bp) protein (295aa)
ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000344933C rbh
amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
ABC-type amino acid transport system, permease component protein {ECO:0000313|EMBL:ADJ64421.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
SCNpilot_cont_1000_bf_scaffold_1043_13
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12294..13424)
DNA (1131bp) protein (377aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346873E rbh
amino acid/amide ABC transporter substrate-binding protein, HAAT family rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AFM28126.1}; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
SCNpilot_cont_1000_bf_scaffold_1043_14
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13443..14177)
DNA (735bp) protein (245aa)
Pyridoxal-5'-phosphate phosphatase, Alphaproteobacterial type {ECO:0000313|EMBL:ESR26981.1}; EC=3.1.3.74 {ECO:0000313|EMBL:ESR26981.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Pyridoxal-5'-phosphate phosphatase, Alphaproteobacterial type n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLT6_9RHIZ
pyrimidine 5'-nucleotidase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_cont_1000_bf_scaffold_1043_15
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14264..15151)
DNA (888bp) protein (296aa)
nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:AEG58541.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AEG58541.1};; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
nicotinate-nucleotide pyrophosphorylase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034ACD88 rbh
SCNpilot_cont_1000_bf_scaffold_1043_16
Bacillus lehensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15185..16441)
DNA (1257bp) protein (419aa)
aryldialkylphosphatase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B31A13 rbh
Amidohydrolase {ECO:0000313|EMBL:AIC93149.1}; TaxID=1246626 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus lehensis G1.;"
aryldialkylphosphatase-like protein
SCNpilot_cont_1000_bf_scaffold_1043_17
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(16551..18011)
DNA (1461bp) protein (487aa)
aldehyde dehydrogenase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034514A1 rbh
aldehyde dehydrogenase aldh
Tax=CSP1_4_Chloroflexi
SCNpilot_cont_1000_bf_scaffold_1043_18
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18015..18752)
DNA (738bp) protein (246aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:EIJ78261.1}; EC=4.1.1.23 {ECO:0000313|EMBL:EIJ78261.1};; TaxID=997296 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methanolicus PB1.;"
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
orotidine 5-phosphate decarboxylase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034BCAA8 rbh
SCNpilot_cont_1000_bf_scaffold_1043_19
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18947..19876
DNA (930bp) protein (310aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
ribose-phosphate pyrophosphokinase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003490CE3 rbh
SCNpilot_cont_1000_bf_scaffold_1043_20
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19925..20890)
DNA (966bp) protein (322aa)
ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000345CA3C
cobalamin synthesis protein P47K
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_cont_1000_bf_scaffold_1043_21
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20887..21405)
DNA (519bp) protein (173aa)
competence damage-inducible protein A n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034D7B5A
Competence/damage-inducible CinA C-terminal domain protein {ECO:0000313|EMBL:EKF25912.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
CinA-like protein; K03743
SCNpilot_cont_1000_bf_scaffold_1043_22
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21597..23069
DNA (1473bp) protein (491aa)
transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B61963 rbh
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ADJ27711.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
SCNpilot_cont_1000_bf_scaffold_1043_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23127..24548)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003614C54
L-serine ammonia-lyase {ECO:0000313|EMBL:EKS29676.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
L-serine dehydratase 1
SCNpilot_cont_1000_bf_scaffold_1043_24
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24902..25984)
DNA (1083bp) protein (361aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IEG4_BEII9
Oxidoreductase {ECO:0000313|EMBL:GAN76982.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Displaying 24 items

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