name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_bf_scaffold_1176_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
108..1073
|
DNA polymerase, beta-like region n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MJ8_MESSB
DNA polymerase, beta-like region
DNA polymerase, beta-like region {ECO:0000313|EMBL:ABG61371.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1176_2
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1082..1597
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MJ7_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61372.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1176_3
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1597..3864
|
UPI0003CE54B1 related cluster n=1 Tax=unknown RepID=UPI0003CE54B1
rbh
Uncharacterized protein {ECO:0000313|EMBL:ESW98077.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_1176_4
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3881..4882)
|
hypothetical protein id=12555718 bin=CNBR_ACIDO species=Pseudomonas sp. CF149 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rbh
Uncharacterized protein {ECO:0000313|EMBL:KJN47787.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_1176_5
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5368..6351
|
P-type conjugative transfer ATPase TrbB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4H4_9BRAD
Conjugal transfer protein TrbB {ECO:0000313|EMBL:KGJ02979.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
trbB1; P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
|
|
SCNpilot_cont_1000_bf_scaffold_1176_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6348..6758
|
P-type conjugative transfer ATPase TrbB n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J175_POLGS
Conjugal transfer protein TrbC {ECO:0000313|EMBL:CDN94538.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
P-type conjugative transfer ATPase TrbB; K03197 type IV secretion system protein VirB2
|
|
SCNpilot_cont_1000_bf_scaffold_1176_7
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6758..7039
|
Conjugal transfer protein TrbB n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ID56_XANP2
Conjugal transfer protein {ECO:0000313|EMBL:KGJ02981.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3
|
|
SCNpilot_cont_1000_bf_scaffold_1176_8
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7050..9317
|
Conjugal transfer ATPase TrbE n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W888_9SPHN
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KGJ02982.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
trbE2; conjugal transfer protein trbE; K03199 type IV secretion system protein VirB4
|
|
SCNpilot_cont_1000_bf_scaffold_1176_9
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9314..10078
|
Conjugal transfer protein TrbJ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNM4_9SPHN
rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KGJ02983.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
P-type conjugative transfer protein TrbJ
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_1176_10
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10089..10376
|
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036EB075
Conjugal transfer protein TrbK {ECO:0000313|EMBL:KGJ02984.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_1176_11
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10380..11741
|
P-type conjugative transfer protein TrbL n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4I0_9BRAD
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KGJ02985.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
trbL2; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
|
|
SCNpilot_cont_1000_bf_scaffold_1176_12
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11738..12427
|
conjugal transfer protein TrbF n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DFF8F1
rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KGJ02986.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
trbF2; conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
|
|
SCNpilot_cont_1000_bf_scaffold_1176_13
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12424..13485
|
Conjugal transfer protein TrbG n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPJ1_9SPHN
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KGJ02987.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
|
|
SCNpilot_cont_1000_bf_scaffold_1176_14
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13482..14639
|
Conjugal transfer protein TrbI n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNM8_9SPHN
rbh
Conjugal transfer protein TraI {ECO:0000313|EMBL:KGJ02988.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
trbI2; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
|
|
SCNpilot_cont_1000_bf_scaffold_1176_15
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14642..14860
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXB8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KHJ54599.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_1176_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14914..15864)
|
PREDICTED: probable RuBisCO transcriptional regulator-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1135B
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:CDN94548.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
LysR family transcriptional regulator
|
|
SCNpilot_cont_1000_bf_scaffold_1176_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15854..17302)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
integral membrane sensor signal transduction histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
rbh
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Nitratireductor indicus C115 RepID=K2NXF0_9RHIZ
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_1176_18
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17299..17964)
|
Two component transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2N584_9RHIZ
Two component transcriptional regulator {ECO:0000313|EMBL:EKF42563.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
two component transcriptional regulator
|
|
SCNpilot_cont_1000_bf_scaffold_1176_19
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18098..18736
|
DSBA oxidoreductase n=1 Tax=Nitratireductor indicus C115 RepID=K2PNB3_9RHIZ
DSBA oxidoreductase {ECO:0000313|EMBL:EKF42562.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
DSBA oxidoreductase
|
|
SCNpilot_cont_1000_bf_scaffold_1176_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18751..20013)
|
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IEG4_BEII9
rbh
Oxidoreductase {ECO:0000313|EMBL:GAN76982.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_1176_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20097..20642
|
TIGR01244 family protein n=1 Tax=Rhizobium sp. CF080 RepID=J2T2Y9_9RHIZ
Beta-lactamase {ECO:0000313|EMBL:ETR77322.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
metallo-beta-lactamase family protein
|
|
SCNpilot_cont_1000_bf_scaffold_1176_22
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20661..21275
|
Putative Zn-dependent hydrolase, Beta-lactamase hydrolase-like protein (BLH-like protein) putative biofilm growth-associated protein {ECO:0000313|EMBL:CCF20353.1}; EC=3.-.-.- {ECO:0000313|EMBL:CCF20353.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000307F7C9
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_1176_23
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21275..21694
|
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDG2_METPB
hypothetical protein; K07112
Uncharacterized protein {ECO:0000313|EMBL:ACB79505.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1176_24
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22049..22711
|
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NJ86_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF20357.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
transmembrane protein; K07090
|