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SCNpilot_cont_1000_bf_scaffold_1191

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1191_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(236..2686)
DNA (2451bp) protein (817aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003769248 rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ERF80264.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_1000_bf_scaffold_1191_2
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3152..4024
DNA (873bp) protein (291aa)
enoyl-CoA hydratase (EC:4.2.1.17); K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Pseudomonas sp. GM21 RepID=J2P428_9PSED
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:AHH19832.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
SCNpilot_cont_1000_bf_scaffold_1191_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4266..5633)
DNA (1368bp) protein (456aa)
HlyD family type I secretion membrane fusion protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLJ8_9BRAD
HlyD family type I secretion membrane fusion protein {ECO:0000313|EMBL:EKS41654.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Type I secretion membrane fusion protein, HlyD
SCNpilot_cont_1000_bf_scaffold_1191_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5664..7787)
DNA (2124bp) protein (708aa)
type I secretion system ATPase, PrtD (EC:3.6.3.25); K06148 ATP-binding cassette, subfamily C, bacterial
Type I secretion system ATPase, PrtD {ECO:0000313|EMBL:ABA04224.1}; EC=3.6.3.25 {ECO:0000313|EMBL:ABA04224.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Type I secretion system ATPase, PrtD n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SU17_NITWN
SCNpilot_cont_1000_bf_scaffold_1191_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7817..9787)
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJ84_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63713.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_1191_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9905..10747)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJD1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41651.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1191_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11012..11563)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJ86_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63711.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_1191_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11727..12206
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJ87_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63710.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_1191_9
bacterium YEK0313, Bacteria

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12550..13059
DNA (510bp) protein (170aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000379DD43
2-oxoisovalerate dehydrogenase subunit alpha {ECO:0000313|EMBL:CEJ14852.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Displaying 9 items

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