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SCNpilot_cont_1000_bf_scaffold_1405

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1405_1
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1361..2590)
DNA (1230bp) protein (410aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V710_SPHWW rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ABQ68076.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_1000_bf_scaffold_1405_2
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2587..4059)
DNA (1473bp) protein (491aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KPA0_METC4
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACK85352.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
SCNpilot_cont_1000_bf_scaffold_1405_3
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4108..5475)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00038231AC rbh
Aminotransferase {ECO:0000313|EMBL:KIY38423.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
aminotransferase rbh
SCNpilot_cont_1000_bf_scaffold_1405_4
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5740..6741
DNA (1002bp) protein (334aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WSM8_9NOCA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EME14414.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
ABC transporter substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_1405_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6789..7790
DNA (1002bp) protein (334aa)
ABC transport protein, periplasmic component n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QFG6_BORBO
ABC transporter substrate-binding protein
NMT1/THI5-like protein {ECO:0000313|EMBL:KDD54262.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_1000_bf_scaffold_1405_6
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7850..8713
DNA (864bp) protein (288aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CRD67821.1}; EC=3.6.3.- {ECO:0000313|EMBL:CRD67821.1};; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
ABC transport protein, ATP-binding component n=31 Tax=Bordetella RepID=F4LH90_BORPC
ABC transporter ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_1405_7
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8710..9531
DNA (822bp) protein (274aa)
ABC transport protein, inner membrane component n=1 Tax=Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 / 18323) RepID=J7RH98_BORP1
ABC transporter inner membrane protein {ECO:0000313|EMBL:CRD64163.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
ABC transporter inner membrane protein
SCNpilot_cont_1000_bf_scaffold_1405_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9576..10343)
DNA (768bp) protein (256aa)
Putative IclR-family transcriptional regulator n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SM34_METPP
IclR family transcriptional regulator
Putative IclR-family transcriptional regulator {ECO:0000313|EMBL:ABM96623.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_cont_1000_bf_scaffold_1405_9
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10902..13064)
DNA (2163bp) protein (721aa)
torG; trimethylamine-N-oxide reductase (cytochrome c); K07812 trimethylamine-N-oxide reductase (cytochrome c) 2 [EC:1.7.2.3]
Biotin sulfoxide reductase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0V3_9PROT
Biotin sulfoxide reductase {ECO:0000313|EMBL:EHM00835.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_1000_bf_scaffold_1405_10
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13107..13790)
DNA (684bp) protein (228aa)
amidohydrolase n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B4E9E1
Pyrimidine utilization protein B {ECO:0000313|EMBL:EFL06748.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
nicotinamidase-like amidase
SCNpilot_cont_1000_bf_scaffold_1405_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13986..14570
DNA (585bp) protein (195aa)
Cysteine dioxygenase type I n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2A4_AZOS1
cysteine dioxygenase type I
Cysteine dioxygenase type I {ECO:0000313|EMBL:BAI74924.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_1000_bf_scaffold_1405_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14570..15337
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003710DE8
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABQ68074.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_1000_bf_scaffold_1405_13
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15330..17279
DNA (1950bp) protein (650aa)
Acetyl-CoA synthetase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ISQ2_BORPD
Acetyl-CoA synthetase
Acetyl-CoA synthetase {ECO:0000313|EMBL:CAP43329.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_1000_bf_scaffold_1405_14
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17297..18034
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H8W8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86287.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
enoyl-CoA hydratase/isomerase
Displaying 14 items

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