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SCNpilot_cont_1000_bf_scaffold_1417

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1417_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..262
DNA (261bp) protein (87aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2S0_RHOP2
SCNpilot_cont_1000_bf_scaffold_1417_2
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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519..1754
DNA (1236bp) protein (412aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZGU4_9BRAD
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_1000_bf_scaffold_1417_3
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1732..2040)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2P4C5_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KCZ94072.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
SCNpilot_cont_1000_bf_scaffold_1417_4
unknown

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2345..2545
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1417_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2545..2943
DNA (399bp) protein (133aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
NUDIX hydrolase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR20_9BRAD
NUDIX hydrolase {ECO:0000313|EMBL:EAQ37573.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_1000_bf_scaffold_1417_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3858..4667
DNA (810bp) protein (270aa)
Competence protein F-like protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGJ0_9BRAD
Competence protein F-like protein {ECO:0000313|EMBL:EGP09730.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
phosphoribosyltransferase
SCNpilot_cont_1000_bf_scaffold_1417_7
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4698..4979
DNA (282bp) protein (94aa)
Glutaredoxin 3 n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETE8_BRASB
grxC; glutaredoxin; K03676 glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:ABQ39442.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_1000_bf_scaffold_1417_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4976..5854
DNA (879bp) protein (293aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K01459 [EC:3.5.1.77]
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQX8_NITHX
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABE61369.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_1417_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5851..6315
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETF0_BRASB
Uncharacterized protein {ECO:0000313|EMBL:KIZ35408.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1417_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6381..6821
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQY1_NITHX
hypothetical protein; K08978 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61366.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_1417_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6828..7736)
DNA (909bp) protein (303aa)
EamA-like transporter family n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QLH4_9BRAD
EamA-like transporter family {ECO:0000313|EMBL:EIG60630.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1417_12
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7847..8476)
DNA (630bp) protein (210aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5T1_9BRAD
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_1000_bf_scaffold_1417_13
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8497..9084)
DNA (588bp) protein (196aa)
Membrane-flanked domain n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQY4_NITHX
Membrane protein {ECO:0000313|EMBL:KJC60263.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
membrane-flanked domain-containing protein
SCNpilot_cont_1000_bf_scaffold_1417_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9118..10002
DNA (885bp) protein (295aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Aspartokinase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J421_RHOP2
SCNpilot_cont_1000_bf_scaffold_1417_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9999..10187
DNA (189bp) protein (63aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IBT7_9BRAD
SCNpilot_cont_1000_bf_scaffold_1417_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10213..10875
DNA (663bp) protein (221aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F8_9BRAD
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
antibiotic resistance protein; K05595 multiple antibiotic resistance protein
SCNpilot_cont_1000_bf_scaffold_1417_17
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11167..13434
DNA (2268bp) protein (756aa)
phosphoenolpyruvate-protein phosphotransferase PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
PTSINtr with GAF domain, PtsP n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BZ8_RHOPB
Peptidase {ECO:0000313|EMBL:KJC51659.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_1000_bf_scaffold_1417_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13485..14558
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=2 Tax=Bradyrhizobiaceae RepID=F7QGR0_9BRAD rbh
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_cont_1000_bf_scaffold_1417_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14666..15556
DNA (891bp) protein (297aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
Release factor glutamine methyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQY8_NITHX
SCNpilot_cont_1000_bf_scaffold_1417_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16095..16853
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J427_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD04783.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_1000_bf_scaffold_1417_21
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16956..17696)
DNA (741bp) protein (247aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HVH4_9BRAD
Methyltransferase type 11 {ECO:0000313|EMBL:KJC47287.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1417_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17816..18583
DNA (768bp) protein (256aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Hydroxyacylglutathione hydrolase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P773_9BRAD
SCNpilot_cont_1000_bf_scaffold_1417_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18583..19023
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13F07_RHOPS
hypothetical protein; K09705 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE37332.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_1000_bf_scaffold_1417_24
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19020..19892)
DNA (873bp) protein (291aa)
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035D2AD2
Membrane protein {ECO:0000313|EMBL:KJC47290.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1417_25
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19962..20687)
DNA (726bp) protein (242aa)
acetoacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH81_NITHX
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:KJC60273.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_1000_bf_scaffold_1417_26
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20846..21850)
DNA (1005bp) protein (335aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EAQ37595.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EAQ37595.1};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WQZ4_9BRAD
Displaying 26 items

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