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SCNpilot_cont_1000_bf_scaffold_1421

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1421_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..757
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IFE7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF81159.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_1000_bf_scaffold_1421_2
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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747..1043
DNA (297bp) protein (99aa)
Inner-membrane translocator n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T1U8_9BRAD
Inner-membrane translocator {ECO:0000313|EMBL:CCE00425.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
putative ABC-type branched-chain amino acid transport system, permease component
SCNpilot_cont_1000_bf_scaffold_1421_3
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1110..1625
DNA (516bp) protein (172aa)
amino acid ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI000369EF8D
Inner-membrane translocator {ECO:0000313|EMBL:CCE00425.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_1000_bf_scaffold_1421_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1622..2197
DNA (576bp) protein (192aa)
amino acid ABC transporter ATP-binding protein (EC:3.6.3.17); K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T1U7_9BRAD
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC49348.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_1000_bf_scaffold_1421_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2187..2636
DNA (450bp) protein (150aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GUD3_9BRAD
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC49349.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_1421_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2914..4296
DNA (1383bp) protein (461aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFV5_METNO
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_1000_bf_scaffold_1421_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4306..5643
DNA (1338bp) protein (446aa)
Uncharacterized protein DUF1446 n=1 Tax=Rhodovulum sp. PH10 RepID=J6JFX9_9RHOB
Uncharacterized protein DUF1446 {ECO:0000313|EMBL:EJW13595.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1421_8
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5643..5951
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZC27_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM91006.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_1000_bf_scaffold_1421_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6066..7421
DNA (1356bp) protein (452aa)
amidase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJX8_NITHX
Amidase {ECO:0000313|EMBL:ABE63469.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_1421_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7445..8137
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139X2_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE39117.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_1000_bf_scaffold_1421_11
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8212..8955
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QCL9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ68507.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein; K09990 hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_1421_12
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9022..9621
DNA (600bp) protein (200aa)
Alkylated DNA repair protein AlkB n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZBA8_9BRAD
alkylated DNA repair protein AlkB
Alkylated DNA repair protein AlkB {ECO:0000313|EMBL:BAM91002.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_1000_bf_scaffold_1421_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10018..10887)
DNA (870bp) protein (290aa)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC:4.1.1.68 5.3.3.10)
Xanthine phosphoribosyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IC62_9BRAD rbh
Xanthine phosphoribosyltransferase {ECO:0000313|EMBL:ERF81170.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_1000_bf_scaffold_1421_14
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10891..11874)
DNA (984bp) protein (328aa)
metapyrocatechase (EC:1.13.11.2); K00446 catechol 2,3-dioxygenase [EC:1.13.11.2]
Bll2967 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89R05_BRADU
Putative Metapyrocatechase {ECO:0000313|EMBL:KGJ68512.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_1000_bf_scaffold_1421_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11956..12354)
DNA (399bp) protein (133aa)
5-carboxymethyl-2-hydroxymuconate isomerase HpcD-like protein (EC:5.3.3.10); K01826 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FE3599
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:ERF81173.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_1000_bf_scaffold_1421_16
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12389..13195)
DNA (807bp) protein (269aa)
hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC:4.2.-.-); K02509 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
2-oxo-hept-3-ene-1,7-dioate hydratase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000380904A rbh
2-oxo-hepta-3-ene-1,7-dioate hydratase {ECO:0000313|EMBL:KJC49357.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_1000_bf_scaffold_1421_17
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13511..13855
DNA (345bp) protein (115aa)
Homoprotocatechuate degradation operon regulator, HpaR n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IC67_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:KJC49358.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
MarR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_1421_18
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14004..14549
DNA (546bp) protein (182aa)
hypothetical protein; K13574 uncharacterized oxidoreductase [EC:1.1.1.-]
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D327_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:BAL12038.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
Displaying 18 items

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