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SCNpilot_cont_1000_bf_scaffold_1757

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1757_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..380
DNA (378bp) protein (126aa)
Diacylglycerol kinase {ECO:0000313|EMBL:ABD08078.1}; EC=2.7.1.107 {ECO:0000313|EMBL:ABD08078.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Diacylglycerol kinase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDP5_RHOPX
diacylglycerol kinase
SCNpilot_cont_1000_bf_scaffold_1757_2
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

487..2061
DNA (1575bp) protein (525aa)
NAD synthetase (EC:6.3.5.1); K01916 NAD+ synthase [EC:6.3.1.5]
NAD+ synthetase {ECO:0000313|EMBL:ACB94403.1}; EC=6.3.5.1 {ECO:0000313|EMBL:ACB94403.1};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
NAD+ synthetase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IGY9_BEII9
SCNpilot_cont_1000_bf_scaffold_1757_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2280..2744
DNA (465bp) protein (155aa)
DoxX n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLJ1_NITHX
DoxX protein
DoxX {ECO:0000313|EMBL:ABE62906.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_1757_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2738..3298)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036E1629
Dihydrofolate reductase {ECO:0000313|EMBL:KJC59742.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1757_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3327..4211)
DNA (885bp) protein (295aa)
Polysaccharide deacetylase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135R9_RHOPS
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABE40170.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_1000_bf_scaffold_1757_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4418..5896)
DNA (1479bp) protein (493aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215N9_RHOPB
hypothetical protein
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABD87897.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_1000_bf_scaffold_1757_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6089..6511
DNA (423bp) protein (141aa)
CreA family protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07NZ6_RHOP5
CreA family protein; K05805 CreA protein
CreA family protein {ECO:0000313|EMBL:ABJ06338.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_1000_bf_scaffold_1757_8
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6504..7355)
DNA (852bp) protein (284aa)
UPI0003CEAA1F related cluster n=1 Tax=unknown RepID=UPI0003CEAA1F
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY88244.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_1757_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7536..8948
DNA (1413bp) protein (471aa)
UPI0003CE77E5 related cluster n=1 Tax=unknown RepID=UPI0003CE77E5 rbh
FAD-linked oxidase {ECO:0000313|EMBL:ESW92480.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
putative FAD/FMN-containing dehydrogenase
SCNpilot_cont_1000_bf_scaffold_1757_10
unknown

Not on your lists

9150..9308
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1757_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9315..9572)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135S3_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE40166.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_1000_bf_scaffold_1757_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9581..9733)
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215N2_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87904.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_1000_bf_scaffold_1757_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9880..11160
DNA (1281bp) protein (427aa)
Acetylornithine deacetylase {ECO:0000313|EMBL:KIZ42733.1}; EC=3.5.1.16 {ECO:0000313|EMBL:KIZ42733.1};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
acetylornithine deacetylase; K01438 acetylornithine deacetylase [EC:3.5.1.16]
ArgE/DapE family peptidase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GVE1_9BRAD
SCNpilot_cont_1000_bf_scaffold_1757_14
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11285..11683
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DGC1_BRAJP
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KJC59731.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1757_15
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11940..12581
DNA (642bp) protein (214aa)
GNAT family acetyltransferase (EC:2.3.1.-); K00680 [EC:2.3.1.-]
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAL9_9BRAD
Acetyltransferase {ECO:0000313|EMBL:KJC35351.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_1000_bf_scaffold_1757_16
unknown

Not on your lists

comp(12629..12841)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1757_17
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13048..13353)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G952_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJC55286.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
SCNpilot_cont_1000_bf_scaffold_1757_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13453..13752)
DNA (300bp) protein (100aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003630FE4
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46064.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1757_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13823..14503)
DNA (681bp) protein (227aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSA3_NITWN
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EAQ35556.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_1000_bf_scaffold_1757_20
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14675..14812
DNA (138bp) protein (46aa)
Glutathione S-transferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IG90_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC59724.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_1000_bf_scaffold_1757_21
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14815..15681)
DNA (867bp) protein (289aa)
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F69_MESSB
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDP54143.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_1757_22
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16090..16779
DNA (690bp) protein (230aa)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:KFG70878.1}; EC=1.14.13.2 {ECO:0000313|EMBL:KFG70878.1};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
P-hydroxybenzoate hydroxylase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0K5_9RHIZ
SCNpilot_cont_1000_bf_scaffold_1757_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16954..18000
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMS4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39668.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1757_24
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18279..18983
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000364B7F9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ69723.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_1757_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18992..19891)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IXE4_METNO
Multidrug DMT transporter permease {ECO:0000313|EMBL:KIZ42876.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1757_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20081..20302
DNA (222bp) protein (74aa)
Putative lipoprotein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V643_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08213.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
lipoprotein
SCNpilot_cont_1000_bf_scaffold_1757_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20404..21282)
DNA (879bp) protein (293aa)
Glutathione S-transferase domain n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VJC1_RHOPX rbh
glutathione S-transferase domain-containing protein; K11209 GST-like protein rbh
Glutathione S-transferase domain {ECO:0000313|EMBL:ADU44367.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_1000_bf_scaffold_1757_28
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21413..22468)
DNA (1056bp) protein (352aa)
Arsenical-resistance protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JKA0_OLICO
arsB; arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
Arsenite efflux pump protein {ECO:0000313|EMBL:AEI08266.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_1757_29
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22471..22998)
DNA (528bp) protein (176aa)
Protein-tyrosine-phosphatase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK99_OLICO
ArsR family transcriptional regulator
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:AEI08267.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_1757_30
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22991..23356)
DNA (366bp) protein (122aa)
Putative transcriptional regulator, ArsR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JK98_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig141, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53516.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ArsR family transcriptional regulator
Displaying items 1-30 of 32 in total

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