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SCNpilot_cont_1000_bf_scaffold_1808

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1808_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..617
DNA (615bp) protein (205aa)
cation transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036D0629
Cation transporter {ECO:0000313|EMBL:KIZ48164.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
multi anti extrusion protein MatE
SCNpilot_cont_1000_bf_scaffold_1808_trna_1
unknown

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722..792
DNA (71bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_1808_2
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(851..2965)
DNA (2115bp) protein (705aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035CBCAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65889.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_1000_bf_scaffold_1808_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3312..4313
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D493A4
Cyclohexanone monooxygenase {ECO:0000313|EMBL:KJC61083.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
phenylacetone monooxygenase
SCNpilot_cont_1000_bf_scaffold_1808_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4385..4819
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D493A4
Cyclohexanone monooxygenase {ECO:0000313|EMBL:KJC61083.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
phenylacetone monooxygenase
SCNpilot_cont_1000_bf_scaffold_1808_5
Serratia fonticola, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4846..5601
DNA (756bp) protein (252aa)
Hydrolase (HAD superfamily) n=1 Tax=Serratia fonticola AU-AP2C RepID=U2N9E0_SERFO
Alpha/beta hydrolase {ECO:0000313|EMBL:AKG71471.1}; TaxID=47917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia fonticola.;"
alpha/beta hydrolase
SCNpilot_cont_1000_bf_scaffold_1808_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5659..6825
DNA (1167bp) protein (389aa)
oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035C641D
NADH:flavin oxidoreductase / NADH oxidase {ECO:0000313|EMBL:KJC57555.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
NADH:flavin oxidoreductase
SCNpilot_cont_1000_bf_scaffold_1808_7
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6936..7301)
DNA (366bp) protein (122aa)
SnoaL-like polyketide cyclase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QLT1_9BRAD
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:EIG60737.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1808_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7542..9200)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HGX7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ERF83706.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
FAD-binding dehydrogenase; K07077 rbh
SCNpilot_cont_1000_bf_scaffold_1808_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9454..9912
DNA (459bp) protein (153aa)
signal peptide protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000377702B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE30129.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_1000_bf_scaffold_1808_10
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10191..10787
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFY5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83703.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
cytochrome C oxidase assembly factor transmembrane protein; K07152
SCNpilot_cont_1000_bf_scaffold_1808_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10771..12750)
DNA (1980bp) protein (660aa)
glycosyl transferase family 2 n=1 Tax=Afipia birgiae RepID=UPI00036BD466
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFI50984.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
glycosyl transferase family 2 protein
SCNpilot_cont_1000_bf_scaffold_1808_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12937..13374
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NVI9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34322.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
extracellular solute-binding protein
SCNpilot_cont_1000_bf_scaffold_1808_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13341..13700
DNA (360bp) protein (120aa)
Amino acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP5_NITHX
extracellular solute-binding protein
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:ABE61102.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_1808_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13757..14041
DNA (285bp) protein (95aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
lysine--tRNA ligase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6]
lysyl-tRNA synthetase n=1 Tax=Afipia birgiae RepID=UPI0002F41884
Displaying 15 items

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