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SCNpilot_cont_1000_bf_scaffold_1818

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1818_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..442
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036CA125
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC56818.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_1818_2
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(452..1099)
DNA (648bp) protein (216aa)
Putative two-component response regulator, HTH luxR family n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z4X4_9BRAD
putative two-component response regulator, HTH luxR family
Putative two-component response regulator, HTH luxR family {ECO:0000313|EMBL:BAM88254.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_1000_bf_scaffold_1818_3
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1307..2437
DNA (1131bp) protein (377aa)
Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YQF4_9BRAD
Signal transduction histidine kinase, glucose-6-phosphate specific {ECO:0000313|EMBL:EHR04786.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
two-component sensor histidine kinase
SCNpilot_cont_1000_bf_scaffold_1818_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2579..4888)
DNA (2310bp) protein (770aa)
TonB-dependent receptor n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07MS9_RHOP5
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:ABJ06755.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_1000_bf_scaffold_1818_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5103..5948)
DNA (846bp) protein (282aa)
Alcohol ABC transporter permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HBR2_9BRAD
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ABC transporter permease; K09686 antibiotic transport system permease protein
SCNpilot_cont_1000_bf_scaffold_1818_6
Methylocapsa acidiphila, Methylocapsa, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5945..6757)
DNA (813bp) protein (271aa)
ABC transporter ATP-binding protein (EC:3.6.3.-); K01990 ABC-2 type transport system ATP-binding protein
Abc transporter atp-binding protein, similar to blr6190 of Bradyrhizobium japonicum n=1 Tax=Methylocapsa acidiphila RepID=Q2VNI7_METAI
Abc transporter atp-binding protein, similar to blr6190 of Bradyrhizobium japonicum {ECO:0000313|EMBL:CAJ01645.1}; TaxID=133552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocapsa.;" source="Methylocapsa acidiphila.;"
SCNpilot_cont_1000_bf_scaffold_1818_7
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6730..7713)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ENZ1_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ37885.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_1000_bf_scaffold_1818_8
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7739..8989)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TY47_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE11385.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_1818_9
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9319..10017
DNA (699bp) protein (233aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QL95_9BRAD
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EIG60551.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
two-component response regulator
SCNpilot_cont_1000_bf_scaffold_1818_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10251..11603)
DNA (1353bp) protein (451aa)
histidine kinase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035DCF8E rbh
two-component hybrid sensor and regulator
ATPase {ECO:0000313|EMBL:KJC39010.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_1000_bf_scaffold_1818_11
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11600..12586)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SSQ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD97235.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1818_12
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12852..13619
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHA6_RHIRD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGP53975.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
short-chain dehydrogenase
SCNpilot_cont_1000_bf_scaffold_1818_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13730..14473)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E723B2
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50319.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
acoR; transcriptional activator of acetoin catabolism
SCNpilot_cont_1000_bf_scaffold_1818_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14460..15506)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E723B2
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50319.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Fis family GAF modulated sigma54 specific transcriptional regulator
Displaying 14 items

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