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SCNpilot_cont_1000_bf_scaffold_1869

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1869_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..260
DNA (258bp) protein (86aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036EB1A4
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43836.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_1869_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257..973
DNA (717bp) protein (239aa)
ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI000380F8D4 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43835.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_1869_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1004..2098
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IBL4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE67281.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1869_4
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2301..3398
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QT35_RALPI
Uncharacterized protein {ECO:0000313|EMBL:AGW93303.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
aminoglycoside phosphotransferase
SCNpilot_cont_1000_bf_scaffold_1869_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3398..4432
DNA (1035bp) protein (345aa)
Acyl-CoA dehydrogenase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QZ17_RALPI
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIZ44024.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
acyl-CoA dehydrogenase
SCNpilot_cont_1000_bf_scaffold_1869_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4482..6125
DNA (1644bp) protein (548aa)
fatty-acid--CoA ligase (EC:6.2.1.-) rbh
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Pseudomonas sp. GM55 RepID=J3GTV2_9PSED rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:KIZ44027.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_1000_bf_scaffold_1869_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6128..6877
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DR30_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:KIZ44022.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_1869_8
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7067..8266
DNA (1200bp) protein (400aa)
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TTV6_TISMK
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein {ECO:0000313|EMBL:EJZ30933.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein
SCNpilot_cont_1000_bf_scaffold_1869_9
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8462..10189)
DNA (1728bp) protein (576aa)
acyl-CoA synthetase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Putative long-chain fatty acid--CoA ligase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9T7_RHOPA
Acyl-CoA synthetase {ECO:0000313|EMBL:EJZ30932.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_1000_bf_scaffold_1869_10
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10221..13574)
DNA (3354bp) protein (1118aa)
Carbamoyl-phosphate synthase L chain ATP-binding n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q688_RHOPT
Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:KIF81143.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
carbamoyl-phosphate synthase L chain ATP-binding
SCNpilot_cont_1000_bf_scaffold_1869_11
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13663..14088
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Acinetobacter lwoffii CIP 70.31 RepID=N9H4A2_ACILW
MarR family transcriptional regulator {ECO:0000313|EMBL:EJZ30938.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
MarR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_1869_12
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14155..15777
DNA (1623bp) protein (541aa)
AMP-dependent synthetase/ligase (EC:6.2.1.26); K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABB06165.1}; EC=6.2.1.26 {ECO:0000313|EMBL:ABB06165.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
AMP-dependent synthetase and ligase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39N01_BURS3
SCNpilot_cont_1000_bf_scaffold_1869_13
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16079..17383
DNA (1305bp) protein (435aa)
(R)-benzylsuccinyl-CoA dehydrogenase (EC:1.3.99.21) rbh
(R)-benzylsuccinyl-CoA dehydrogenase {ECO:0000313|EMBL:AEG50961.1}; EC=1.3.8.3 {ECO:0000313|EMBL:AEG50961.1};; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036F4D3A rbh
SCNpilot_cont_1000_bf_scaffold_1869_14
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17690..17902)
DNA (213bp) protein (71aa)
UPI0003CDE28D related cluster n=1 Tax=unknown RepID=UPI0003CDE28D
Uncharacterized protein {ECO:0000313|EMBL:ESY80302.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
class III aminotransferase
SCNpilot_cont_1000_bf_scaffold_1869_15
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18105..18866)
DNA (762bp) protein (254aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQU1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC42351.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
class III aminotransferase
SCNpilot_cont_1000_bf_scaffold_1869_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18930..19703)
DNA (774bp) protein (258aa)
UPI0003D05504 related cluster n=1 Tax=unknown RepID=UPI0003D05504
IclR family transcriptional regulator {ECO:0000313|EMBL:ESZ27307.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
IclR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_1869_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19810..21201
DNA (1392bp) protein (464aa)
Aminotransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YE90_9RHIZ
Aminotransferase {ECO:0000313|EMBL:CDX51480.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
aminotransferase
SCNpilot_cont_1000_bf_scaffold_1869_18
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21204..22004
DNA (801bp) protein (267aa)
3-ketoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GQV5_9BRAD rbh
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ERF79992.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_1000_bf_scaffold_1869_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22004..22774
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6B1_9BRAD rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDX35791.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_bf_scaffold_1869_20
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23787..24866
DNA (1080bp) protein (360aa)
Transcriptional regulator, AraC family n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QK90_9BRAD
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGP08259.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
helix-turn-helix domain-containing protein
SCNpilot_cont_1000_bf_scaffold_1869_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25296..26372
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NS53_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31956.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_1869_22
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26493..27035
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NNN0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31957.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
Displaying 22 items

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