name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_bf_scaffold_1915_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..254
|
UDPglucose 6-dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6V9_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46800.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
TRAP dicarboxylate transporter subunit DctP
|
|
SCNpilot_cont_1000_bf_scaffold_1915_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
393..962
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030A47D2
rbh
Dihydroxyacetone kinase {ECO:0000313|EMBL:ERF80177.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
TRAP dicarboxylate family transporter DctQ subunit
|
|
SCNpilot_cont_1000_bf_scaffold_1915_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
991..2139
|
TRAP transporter, DctM subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H630_9BRAD
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KJC57604.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
TRAP dicarboxylate transporter subunit DctM
|
|
SCNpilot_cont_1000_bf_scaffold_1915_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2144..2605
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000369109B
UPF0311 protein QU41_20600 {ECO:0000256|HAMAP-Rule:MF_00775}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_1915_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2973..3779
|
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139W8_RHOPS
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABE39121.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3799..5679
|
long-chain-fatty-acid-CoA-ligase; K12508 feruloyl-CoA synthase [EC:6.2.1.34]
feruloyl-CoA synthase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000362FE28
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46797.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5725..6486
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQF3_NITHX
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE61544.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6648..7802
|
Putative branched-chain amino acid transport system substrate-binding protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N8W4_RHOPA
rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ39725.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
branched-chain amino acid transport system substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_1915_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8029..8760)
|
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q9P4_RHOPT
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACF00516.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_10
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8757..9740)
|
Branched-chain amino acid transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ICU4_9BRAD
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:ERF80189.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_11
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9737..10360)
|
metal-dependent hydrolase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000372EC0D
Putative ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter) branched-chain amino acid transport protein {ECO:0000313|EMBL:CCD93222.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
ABC transporter permease/ATP-binding protein
|
|
SCNpilot_cont_1000_bf_scaffold_1915_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10366..10779)
|
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07K10_RHOP5
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ABJ07724.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_13
unknown
|
Not on your lists |
10820..11233
|
This feature has no annotations |
|
SCNpilot_cont_1000_bf_scaffold_1915_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11450..11965
|
MarR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI000379F1F0
MarR family transcriptional regulator {ECO:0000313|EMBL:KIZ39730.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
MarR family transcriptional regulator
|
|
SCNpilot_cont_1000_bf_scaffold_1915_15
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12094..13374)
|
Putative glycerate kinase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QMC9_9BRAD
rbh
Hydroxypyruvate reductase {ECO:0000313|EMBL:KJC33575.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13623..14852)
|
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VJY0_RHOPX
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU43242.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15100..15618)
|
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035C518F
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46785.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
|
|
SCNpilot_cont_1000_bf_scaffold_1915_18
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15618..16172)
|
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003776C63
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EJZ35222.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
|
|
SCNpilot_cont_1000_bf_scaffold_1915_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16179..17201)
|
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003758B35
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46784.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
high-affinity branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
|
|
SCNpilot_cont_1000_bf_scaffold_1915_20
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17204..18082)
|
Branched-chain amino acid transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HG23_9BRAD
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:ERF83748.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
|
|
SCNpilot_cont_1000_bf_scaffold_1915_21
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18094..18807)
|
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H1X1_9BRAD
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:ERF83747.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18804..19538)
|
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZA8_RHOP2
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABD06452.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19514..20350)
|
Transcriptional regulator, IclR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q216A7_RHOPB
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABD87779.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_1000_bf_scaffold_1915_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20745..21644
|
Enoyl-CoA hydratase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N3H7_RHOPA
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KIZ39417.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
|