name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_bf_scaffold_2236_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..415)
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RNA polymerase sigma factor RpoH n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BQ7_RHOPB
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
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SCNpilot_cont_1000_bf_scaffold_2236_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(633..1421)
|
pseudouridine synthase RluD; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Pseudouridine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJH0_NITHX
|
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SCNpilot_cont_1000_bf_scaffold_2236_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1477..1809
|
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TG2_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ04772.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
|
|
SCNpilot_cont_1000_bf_scaffold_2236_trna_1
unknown
|
Not on your lists |
1931..2002
|
transferRNA
|
|
SCNpilot_cont_1000_bf_scaffold_2236_4
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2228..2656)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EBL3_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ33557.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
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SCNpilot_cont_1000_bf_scaffold_2236_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2796..3800)
|
alkane 1-monooxygenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003614248
rbh
Alkane 1-monooxygenase {ECO:0000313|EMBL:AHE52723.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
monooxygenase with ATPase activity, luciferase
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_2236_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4126..4854)
|
3-oxoacyl-ACP reductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003792496
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KJC58132.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
oxidoreductase
|
|
SCNpilot_cont_1000_bf_scaffold_2236_7
unknown
|
Not on your lists |
comp(5247..5351)
|
This feature has no annotations |
|
SCNpilot_cont_1000_bf_scaffold_2236_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6167..6583
|
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTQ3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36702.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ycii-like protein
|
|
SCNpilot_cont_1000_bf_scaffold_2236_9
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6747..7166
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ERI1_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ38775.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
|
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SCNpilot_cont_1000_bf_scaffold_2236_10
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7334..8116
|
TetR family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003727647
Transcriptional regulator {ECO:0000313|EMBL:EJN12516.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
transcriptional regulator
|
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SCNpilot_cont_1000_bf_scaffold_2236_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8244..8720
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WIR0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC38574.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_2236_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9057..9770
|
MotA/TolQ/ExbB proton channel n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20X60_RHOPB
MotA/TolQ/ExbB proton channel; K03562 biopolymer transport protein TolQ
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ABD90276.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_1000_bf_scaffold_2236_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9795..10247
|
Biopolymer transport protein ExbD/TolR n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20X61_RHOPB
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ABD90275.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
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SCNpilot_cont_1000_bf_scaffold_2236_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10254..11198
|
Putative TolA n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20X62_RHOPB
rbh
putative TolA
rbh
Putative TolA {ECO:0000313|EMBL:ABD90274.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
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|
SCNpilot_cont_1000_bf_scaffold_2236_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11230..12582
|
Protein TolB n=2 Tax=Rhodopseudomonas palustris RepID=TOLB_RHOPB
tolB; translocation protein TolB; K03641 TolB protein
Protein TolB {ECO:0000255|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
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|
SCNpilot_cont_1000_bf_scaffold_2236_16
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12767..13660
|
Diguanylate cyclase/phosphodiesterase n=2 Tax=Rhodopseudomonas palustris RepID=B3QIC8_RHOPT
Diguanylate cyclase {ECO:0000313|EMBL:KJC43751.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
diguanylate cyclase/phosphodiesterase
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