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SCNpilot_cont_1000_bf_scaffold_2371

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_2371_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..2065)
DNA (2064bp) protein (688aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDT5_9BRAD
SCNpilot_cont_1000_bf_scaffold_2371_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2682..3926
DNA (1245bp) protein (415aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABE62637.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ABE62637.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB0_NITHX
SCNpilot_cont_1000_bf_scaffold_2371_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4097..6562
DNA (2466bp) protein (822aa)
penicillin-binding protein 1A; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Multimodular transpeptidase-transglycosylase n=2 Tax=Bradyrhizobiaceae RepID=F7QN18_9BRAD
1A family penicillin-binding protein {ECO:0000313|EMBL:EKS40092.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_1000_bf_scaffold_2371_4
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6692..7582
DNA (891bp) protein (297aa)
Bacterial peptide chain release factor 2 (BRF-2) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EJB3_BRASB
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_1000_bf_scaffold_2371_5
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7600..8478
DNA (879bp) protein (293aa)
Dehydrogenase NAD(P)-binding domain-containing protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8H0_9BRAD
dehydrogenase NAD(P)-binding domain-containing protein
Dehydrogenase NAD(P)-binding domain-containing protein {ECO:0000313|EMBL:BAM89667.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_1000_bf_scaffold_2371_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8619..9563
DNA (945bp) protein (315aa)
DMT superfamily permease n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN16_9BRAD
DMT superfamily permease {ECO:0000313|EMBL:EGP07435.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_2371_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9511..11679)
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HK65_9BRAD
Carbamoyltransferase {ECO:0000313|EMBL:KJC35430.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
Carbamoyltransferase
SCNpilot_cont_1000_bf_scaffold_2371_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11801..13141)
DNA (1341bp) protein (447aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IMV5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig178, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47977.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_2371_9
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13232..14080)
DNA (849bp) protein (283aa)
hypothetical protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YTT3_BRASO
Uncharacterized protein {ECO:0000313|EMBL:CAL77309.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_1000_bf_scaffold_2371_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14383..17829
DNA (3447bp) protein (1149aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213P1_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD88395.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_1000_bf_scaffold_2371_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17860..19128)
DNA (1269bp) protein (423aa)
permease n=1 Tax=Afipia birgiae RepID=UPI000370BBC5
permease
Putative permease {ECO:0000313|EMBL:CAE27900.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
Displaying 11 items

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