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SCNpilot_cont_1000_bf_scaffold_265

Search features with annotation key words

Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_265_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..669
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLI0_AFIFE
Bradyrhizobium elkanii strain UASWS1015 Contig156, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52678.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
multicopper oxidase, TAT pathway translocated
SCNpilot_cont_1000_bf_scaffold_265_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

731..1216
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NTH7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31759.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
copper tolerance protein
SCNpilot_cont_1000_bf_scaffold_265_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1249..1551
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHL0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42147.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_265_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1705..2904
DNA (1200bp) protein (400aa)
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCJ9_9BRAD
6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:ERF82196.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_265_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3134..5002
DNA (1869bp) protein (623aa)
Multicopper oxidase n=2 Tax=Oligotropha carboxidovorans RepID=B6JJX9_OLICO rbh
Multicopper oxidase {ECO:0000313|EMBL:KIZ44785.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
multicopper oxidase rbh
SCNpilot_cont_1000_bf_scaffold_265_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5035..5400
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLH5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KIZ44786.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
copper resistance protein C; K07156
SCNpilot_cont_1000_bf_scaffold_265_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5400..6332
DNA (933bp) protein (311aa)
Putative copper resistance protein D n=2 Tax=Oligotropha carboxidovorans RepID=F8BJG0_OLICM
Copper resistance protein D {ECO:0000313|EMBL:CEG06635.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative copper resistance protein D; K07245 putative copper resistance protein D
SCNpilot_cont_1000_bf_scaffold_265_8
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6480..7538)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EUM5_BRASB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ39869.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_1000_bf_scaffold_265_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7632..8228
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4M9_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig152, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53006.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative metal-binding protein
SCNpilot_cont_1000_bf_scaffold_265_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8335..8688
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4M8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06637.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_265_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8786..9193
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4M7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52907.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_265_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9190..10638
DNA (1449bp) protein (483aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM80_NITHX
Cation efflux system protein CusB {ECO:0000313|EMBL:CEG06639.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
SCNpilot_cont_1000_bf_scaffold_265_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10635..13826
DNA (3192bp) protein (1064aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4M5_9BRAD
Cation transporter {ECO:0000313|EMBL:KIZ37577.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
heavy metal efflux pump CzcA rbh
SCNpilot_cont_1000_bf_scaffold_265_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13835..13975
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWI8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31770.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_1000_bf_scaffold_265_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13972..14676
DNA (705bp) protein (235aa)
Cytochrome c, class I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFP6_NITHX
Cytochrome C {ECO:0000313|EMBL:KIZ37576.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c, class I; K08738 cytochrome c
SCNpilot_cont_1000_bf_scaffold_265_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14951..15364)
DNA (414bp) protein (138aa)
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMW1_NITWN
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:ETR79383.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_1000_bf_scaffold_265_17
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15431..17554
DNA (2124bp) protein (708aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3W2_OCHA4
ATPase {ECO:0000313|EMBL:KGE81709.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
SCNpilot_cont_1000_bf_scaffold_265_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17600..18655)
DNA (1056bp) protein (352aa)
Arsenical-resistance protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JKA0_OLICO
arsB; arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
Arsenite efflux pump protein {ECO:0000313|EMBL:AEI08266.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_265_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18658..19038)
DNA (381bp) protein (127aa)
Protein-tyrosine-phosphatase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK99_OLICO
protein-tyrosine-phosphatase
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:AEI08267.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_265_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19520..19843
DNA (324bp) protein (108aa)
Putative transcriptional regulator, ArsR family n=2 Tax=Oligotropha carboxidovorans RepID=F8BR25_OLICM
ArsR family transcriptional regulator
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEI08269.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_265_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19893..21260
DNA (1368bp) protein (456aa)
FAD dependent oxidoreductase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK96_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08270.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_265_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21271..22305
DNA (1035bp) protein (345aa)
Major facilitator superfamily MFS_1 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK95_OLICO rbh
major facilitator superfamily protein rbh
Putative MFS transporter protein {ECO:0000313|EMBL:AEI08271.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_265_23
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22334..23536
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00035DBB4F rbh
Arabinose ABC transporter permease {ECO:0000313|EMBL:ETR76803.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_265_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23650..24066
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000377D956
Uncharacterized protein {ECO:0000313|EMBL:KFC64814.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_265_25
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24483..25211
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RWK7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD86334.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
integrase
SCNpilot_cont_1000_bf_scaffold_265_26
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25212..25910)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RWK6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD86333.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_265_27
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25894..26490)
DNA (597bp) protein (199aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
Putative ExsB superfamily protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RWK5_9BRAD
exoenzyme s synthesis protein b/queuosine synthesis family protein; K06920 queuosine biosynthesis protein QueC
SCNpilot_cont_1000_bf_scaffold_265_28
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26487..27683)
DNA (1197bp) protein (399aa)
Putative nucleoside 2-deoxyribosyltransferase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RWK4_9BRAD rbh
Putative nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:CCD86331.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
nucleoside 2-deoxyribosyltransferase family protein rbh
SCNpilot_cont_1000_bf_scaffold_265_29
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27680..28060)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q090S4_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAU66195.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCNpilot_cont_1000_bf_scaffold_265_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28362..29138)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPJ7_NITHX
Uncharacterized protein {ECO:0000313|EMBL:CEG06666.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
Displaying items 1-30 of 140 in total

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