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SCNpilot_cont_1000_bf_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 175 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_393_1
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233..1624
DNA (1392bp) protein (464aa)
putative CoA-transferase family III, CaiB/BaiF family (EC:2.8.3.16 5.1.99.4) rbh
Putative CoA-transferase family III, CaiB/BaiF family {ECO:0000313|EMBL:CBJ36316.1}; EC=2.8.3.16 {ECO:0000313|EMBL:CBJ36316.1};; EC=5.1.99.4 {ECO:0000313|EMBL:CBJ36316.1};; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
Putative CoA-transferase family III, CaiB/BaiF family n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8N3M9_RALSL rbh
SCNpilot_cont_1000_bf_scaffold_393_2
unknown

Not on your lists

1621..1833
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_393_3
unknown

Not on your lists

2042..2260
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_393_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2315..2965)
DNA (651bp) protein (217aa)
Peptidase S24-like protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHI8_9PROT rbh
Transcriptional regulator phage repressor {ECO:0000313|EMBL:GAN76335.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
peptidase family S24
SCNpilot_cont_1000_bf_scaffold_393_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3140..3520
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUS4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN76334.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_393_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3701..3937
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZLM8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN76333.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_393_7
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3962..4186)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQX2_GRABC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI62780.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_1000_bf_scaffold_393_8
unknown

Not on your lists

4301..4669
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_393_9
unknown

Not on your lists

4683..5027
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_393_10
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5155..6216
DNA (1062bp) protein (354aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00054567}; EC=1.3.-.- {ECO:0000256|SAAS:SAAS00276934};; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate oxidase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHL6_9PROT
SCNpilot_cont_1000_bf_scaffold_393_11
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6221..7087
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000375F562
Hydrolase IIA {ECO:0000313|EMBL:GAN76330.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
HAD-superfamily hydrolase
SCNpilot_cont_1000_bf_scaffold_393_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7233..8090)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E73A5 rbh
Universal stress family protein {ECO:0000313|EMBL:EFH12882.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
universal stress protein UspA-like nucleotide-binding protein
SCNpilot_cont_1000_bf_scaffold_393_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8165..10516)
DNA (2352bp) protein (784aa)
histidine kinase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003762F21
Uncharacterized protein {ECO:0000313|EMBL:KGM33255.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
histidine kinase
SCNpilot_cont_1000_bf_scaffold_393_14
unknown

Not on your lists

comp(10656..11084)
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_393_15
unknown

Not on your lists

comp(11227..11535)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_393_16
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11532..12098)
DNA (567bp) protein (189aa)
Hydrolase, NUDIX family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPY9_9PROT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFH10636.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hydrolase
SCNpilot_cont_1000_bf_scaffold_393_17
unknown

Not on your lists

comp(12291..12566)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_393_18
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12726..14948)
DNA (2223bp) protein (741aa)
monomeric isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
Monomeric isocitrate dehydrogenase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9R4_MAGSA rbh
Monomeric isocitrate dehydrogenase {ECO:0000313|EMBL:BAE49411.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_cont_1000_bf_scaffold_393_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15243..16112
DNA (870bp) protein (290aa)
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Dienelactone hydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HU79_AZOC5
Dienelactone hydrolase {ECO:0000313|EMBL:BAF86914.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_1000_bf_scaffold_393_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16274..17188
DNA (915bp) protein (305aa)
High-affinity branched-chain amino acid ABC transporter, permease protein LivH n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A126_9PROT rbh
Innermembrane translocator {ECO:0000313|EMBL:GAN78507.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
livH; high-affinity branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_1000_bf_scaffold_393_21
unknown

Not on your lists

17185..17286
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_393_22
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17283..18614
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E7883D
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EHM00688.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_1000_bf_scaffold_393_23
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18622..19431
DNA (810bp) protein (270aa)
ABC transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZP36_9PROT rbh
ABC transporter {ECO:0000313|EMBL:EKN01041.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_393_24
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19442..20164
DNA (723bp) protein (241aa)
ABC transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2IX13_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHJ54998.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_393_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20436..21077)
DNA (642bp) protein (214aa)
methionine gamma-lyase (EC:4.4.1.11); K01761 methionine-gamma-lyase [EC:4.4.1.11]
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2Z4_9RHIZ
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:KFC64084.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_1000_bf_scaffold_393_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21681..22424
DNA (744bp) protein (248aa)
Dienelactone hydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ67_9PROT
dienelactone hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_1000_bf_scaffold_393_27
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22525..24966
DNA (2442bp) protein (814aa)
Putative chemotaxis methyl-accepting receptor n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWZ8_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJB91589.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
methyl-accepting chemotaxis protein rbh
SCNpilot_cont_1000_bf_scaffold_393_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25053..26081
DNA (1029bp) protein (343aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGV9_SINAD rbh
F420-dependent methylene-tetrahydromethanopterin reductase rbh
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:AGA28053.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_1000_bf_scaffold_393_29
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26271..27251)
DNA (981bp) protein (327aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036FEC89
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein rbh
SCNpilot_cont_1000_bf_scaffold_393_30
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27334..28815
DNA (1482bp) protein (494aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035C6805
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Displaying items 1-30 of 175 in total

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