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SCNpilot_cont_1000_bf_scaffold_476

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_476_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_476_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336..1742)
DNA (1407bp) protein (469aa)
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Nitratireductor indicus C115 RepID=K2P1Q6_9RHIZ
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:EKF41306.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
SCNpilot_cont_1000_bf_scaffold_476_3
unknown

Not on your lists

2018..2227
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_476_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3233..3727
DNA (495bp) protein (165aa)
UPI0003CFDC49 related cluster n=1 Tax=unknown RepID=UPI0003CFDC49
Uncharacterized protein {ECO:0000313|EMBL:ESZ10260.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_1000_bf_scaffold_476_5
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4382..5179
DNA (798bp) protein (266aa)
capsular polysaccharide biosynthesis protein; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
UPI0003CF2ACF related cluster n=1 Tax=unknown RepID=UPI0003CF2ACF
Capsular biosynthesis protein {ECO:0000313|EMBL:KJV43333.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
SCNpilot_cont_1000_bf_scaffold_476_6
unknown

Not on your lists

comp(5151..5351)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_476_trna_1
unknown

Not on your lists

5263..5334
DNA (72bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_476_7
unknown

Not on your lists

comp(5362..5889)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_476_8
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5876..7531)
DNA (1656bp) protein (552aa)
Putative resolvase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAB1_HYPSM
resolvase
Uncharacterized protein {ECO:0000313|EMBL:BAQ16684.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
SCNpilot_cont_1000_bf_scaffold_476_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7528..7938)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000365CC5A
Putative bacteriophage-related protein {ECO:0000313|EMBL:EDP63867.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCNpilot_cont_1000_bf_scaffold_476_10
unknown

Not on your lists

comp(7993..8238)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_476_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8496..8981
DNA (486bp) protein (162aa)
Antitermination factor NusG n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDM4_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EZQ16923.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
nusG; putative transcription antitermination protein NusG; K05785 transcriptional antiterminator RfaH
SCNpilot_cont_1000_bf_scaffold_476_12
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9075..10382
DNA (1308bp) protein (436aa)
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KTQ3_MESAW
glycosyl transferase possibly involved in lipopolysaccharide synthesis
Glycosyl transferase possibly involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:AGB47369.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_476_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10809..11951
DNA (1143bp) protein (381aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FE04_9RHIZ
SCNpilot_cont_1000_bf_scaffold_476_14
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11932..12951
DNA (1020bp) protein (340aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
GDP-L-fucose synthase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B069_9RHIZ
NAD-dependent epimerase/dehydratase
SCNpilot_cont_1000_bf_scaffold_476_15
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12967..13746
DNA (780bp) protein (260aa)
Glycosyl transferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBC2_9RHIZ
Glycosyl transferase {ECO:0000313|EMBL:ESX65406.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
glycosyl transferase family 2
SCNpilot_cont_1000_bf_scaffold_476_16
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13886..14848
DNA (963bp) protein (321aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TT81_PHAFV rbh
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000313|EMBL:EPY01735.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
oxidoreductase domain-containing protein rbh
SCNpilot_cont_1000_bf_scaffold_476_17
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14850..15425
DNA (576bp) protein (192aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC:2.3.1.89)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035DFCCA
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000313|EMBL:EPY01735.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
SCNpilot_cont_1000_bf_scaffold_476_18
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15422..16546
DNA (1125bp) protein (375aa)
Aminotransferase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMK3_MOBAS rbh
Aminotransferase DegT {ECO:0000313|EMBL:KHJ54205.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
DegT/DnrJ/EryC1/StrS family protein rbh
SCNpilot_cont_1000_bf_scaffold_476_19
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16543..17928
DNA (1386bp) protein (462aa)
UDP-glucose dehydrogenase (EC:1.1.1.22) rbh
UDP-glucose dehydrogenase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VVA8_9PROT rbh
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EXL02823.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_cont_1000_bf_scaffold_476_20
unknown

Not on your lists

18143..18754
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036796E1
SCNpilot_cont_1000_bf_scaffold_476_21
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18751..19674
DNA (924bp) protein (308aa)
fabH2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC:2.3.1.180) rbh
Beta-ketoacyl-acyl-carrier-protein synthase I n=1 Tax=Pseudomonas putida CSV86 RepID=L1LXA7_PSEPU rbh
Beta-ketoacyl-acyl-carrier-protein synthase I {ECO:0000313|EMBL:EKX83361.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
SCNpilot_cont_1000_bf_scaffold_476_22
unknown

Not on your lists

19686..19919
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_476_23
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19927..21057
DNA (1131bp) protein (377aa)
Acetyltransferase (GNAT) domain protein {ECO:0000313|EMBL:ETO92869.1}; TaxID=1274403 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis RV-2-2007.;"
SCNpilot_cont_1000_bf_scaffold_476_24
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21143..23134
DNA (1992bp) protein (664aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ETO92857.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ETO92857.1};; TaxID=1274403 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis RV-2-2007.;"
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B256_9DELT
SCNpilot_cont_1000_bf_scaffold_476_25
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23277..24449
DNA (1173bp) protein (391aa)
Polysaccharide biosynthesis protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WWJ1_ANEAE
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ERI07045.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
polysaccharide biosynthesis protein
SCNpilot_cont_1000_bf_scaffold_476_26
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24449..25837
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ15 RepID=UPI0003680AF7 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA88901.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
SCNpilot_cont_1000_bf_scaffold_476_27
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25884..27218
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F1Y0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV10203.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_1000_bf_scaffold_476_28
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27462..27830
DNA (369bp) protein (123aa)
Transposase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I559_RHOVT
Transposase {ECO:0000313|EMBL:EXL06944.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
transposase
SCNpilot_cont_1000_bf_scaffold_476_29
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27899..28216
DNA (318bp) protein (106aa)
Transposase IS4 family protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I558_RHOVT
Transposase {ECO:0000313|EMBL:AHK47101.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
transposase IS4 family protein
Displaying items 1-30 of 65 in total

View Taxonomy