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SCNpilot_cont_1000_bf_scaffold_485

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_485_1
unknown

Not on your lists

1..216
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_485_trna_1
unknown

Not on your lists

4..76
DNA (73bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_485_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203..1018)
DNA (816bp) protein (272aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Bll0552 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89WX6_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ64988.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_1000_bf_scaffold_485_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1031..1378)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QA95_RHOPT
Uncharacterized protein {ECO:0000313|EMBL:KIZ41177.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_485_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1478..2266)
DNA (789bp) protein (263aa)
glutamine amidotransferase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
Glutamine amidotransferase class-I n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NCQ1_RHOPA
Glutamine amidotransferase class-I {ECO:0000313|EMBL:CAE25862.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_1000_bf_scaffold_485_5
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2377..3153)
DNA (777bp) protein (259aa)
Putative short chain dehydrogenase/reductase family member {ECO:0000313|EMBL:CCE07164.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CCE07164.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
short chain dehydrogenase/reductase family protein (EC:1.1.1.100); K07124
Putative short chain dehydrogenase/reductase family member n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TL26_9BRAD
SCNpilot_cont_1000_bf_scaffold_485_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3175..3648)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P568_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig171, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50067.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_485_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3809..5227)
DNA (1419bp) protein (473aa)
adenylate cyclase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FCF1EC
Adenylate cyclase {ECO:0000313|EMBL:KJC61438.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_485_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5303..6694)
DNA (1392bp) protein (464aa)
Cytochrome P450 n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QA99_RHOPT rbh
cytochrome P450 rbh
Cytochrome P450 {ECO:0000313|EMBL:ACE98985.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_1000_bf_scaffold_485_9
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7088..8782
DNA (1695bp) protein (565aa)
MFS transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036325C0
MFS transporter {ECO:0000313|EMBL:KJC43953.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_485_10
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9288..10049)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D9375A rbh
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CCE09847.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_1000_bf_scaffold_485_11
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10915..11865)
DNA (951bp) protein (317aa)
Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EPC6_BRASB rbh
LysR family transcriptional regulator rbh
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:ABQ38020.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_1000_bf_scaffold_485_12
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11930..13339
DNA (1410bp) protein (470aa)
Putative permease of the major facilitator superfamily n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EPC5_BRASB rbh
major facilitator superfamily permease rbh
Putative permease of the major facilitator superfamily {ECO:0000313|EMBL:ABQ38019.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_1000_bf_scaffold_485_13
unknown

Not on your lists

13359..13505
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_485_14
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13539..14147)
DNA (609bp) protein (203aa)
Putative Transcriptional regulator, TetR family n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TAQ3_9BRAD
Putative Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCE03530.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_485_15
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14246..15103
DNA (858bp) protein (286aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RVH0_9BRAD rbh
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_485_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15111..15527
DNA (417bp) protein (139aa)
Transcriptional regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J8D6_AGRRK
transcriptional regulator protein
Transcriptional regulator protein {ECO:0000313|EMBL:ACM25323.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_1000_bf_scaffold_485_17
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15677..19963)
DNA (4287bp) protein (1429aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU83_PARL1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABS63466.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_bf_scaffold_485_18
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20335..21549
DNA (1215bp) protein (405aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=S0HGT5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AGP47150.1}; TaxID=1348660 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica S13.;"
nucleotide-binding protein containing TIR -like domain
SCNpilot_cont_1000_bf_scaffold_485_19
unknown

Not on your lists

comp(21781..23259)
DNA (1479bp) protein (493aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_485_20
unknown

Not on your lists

comp(23430..24146)
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_485_21
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24591..25169
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G4B2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC42764.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_485_22
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25253..25729
DNA (477bp) protein (159aa)
Acetyltransferase (GNAT) family protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QMP3_9BRAD
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:EIG61049.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
GCN5-like N-acetyltransferase
SCNpilot_cont_1000_bf_scaffold_485_23
unknown

Not on your lists

25776..25979
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_485_24
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25898..26305)
DNA (408bp) protein (136aa)
Putative enzyme {ECO:0000313|EMBL:CCE08804.1}; EC=4.4.-.- {ECO:0000313|EMBL:CCE08804.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Putative enzyme n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TQR6_9BRAD
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_485_25
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26413..27042)
DNA (630bp) protein (210aa)
glutathione S-transferase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036EF699
glutathione S-transferase domain
Tax=RBG_16_Gammaproteobacteria_51_14_curated
SCNpilot_cont_1000_bf_scaffold_485_26
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27108..28073)
DNA (966bp) protein (322aa)
Transcriptional regulator, LysR family n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JJW7_OLICO rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI05256.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_485_27
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28513..29001
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D2K4_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGT75766.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCNpilot_cont_1000_bf_scaffold_485_28
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29142..29468)
DNA (327bp) protein (109aa)
Putative Transcriptional regulator, LuxR family n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RT92_9BRAD
Putative Transcriptional regulator, LuxR family {ECO:0000313|EMBL:CCD85169.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_485_29
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29465..30004)
DNA (540bp) protein (180aa)
Putative transposase n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TIJ1_PARBH
transposase
Putative transposase {ECO:0000313|EMBL:ADM10849.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;"
Displaying items 1-30 of 45 in total

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