name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_bf_scaffold_616_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..550)
|
ccoN2; cbb3-type cytochrome oxidase, subunit CcoN; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
cytochrome C oxidase n=1 Tax=Afipia birgiae RepID=UPI0002D67EE1
Cbb3-type cytochrome oxidase, subunit CcoN {ECO:0000313|EMBL:AEI05687.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_1000_bf_scaffold_616_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(814..1077)
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07040.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1070..1510)
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07039.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
SCNpilot_cont_1000_bf_scaffold_616_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1497..1979)
|
Pseudoazurin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D9_9BRAD
Pseudoazurin {ECO:0000313|EMBL:EFI52469.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
pseudoazurin
|
|
SCNpilot_cont_1000_bf_scaffold_616_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2213..2869)
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F97C3E
Alternative oxidase {ECO:0000313|EMBL:CEG07034.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
oxidase
|
|
SCNpilot_cont_1000_bf_scaffold_616_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3054..3749
|
cyclic nucleotide-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B49B3A
Anaerobic regulatory protein {ECO:0000313|EMBL:CEG07033.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
nnrR; nitrite and nitric oxide reductase regulator
|
|
SCNpilot_cont_1000_bf_scaffold_616_7 |
Not on your lists |
comp(3846..4139)
|
short-chain dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000371AA27
Uncharacterized protein {ECO:0000313|EMBL:KKN71008.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K07234 uncharacterized protein involved in response to NO
|
|
SCNpilot_cont_1000_bf_scaffold_616_8 |
Not on your lists |
comp(4136..4861)
|
Putative NnrS family protein n=1 Tax=uncultured bacterium 1042 RepID=B8R8T0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN71008.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NnrS family protein; K07234 uncharacterized protein involved in response to NO
|
|
SCNpilot_cont_1000_bf_scaffold_616_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4952..8455)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQG0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41745.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
aldehyde dehydrogenase
|
|
SCNpilot_cont_1000_bf_scaffold_616_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8442..8603)
|
Isoquinoline 1-oxidoreductase alpha subunit {ECO:0000313|EMBL:EGP08352.1}; EC=1.3.99.16 {ECO:0000313|EMBL:EGP08352.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
(2Fe-2S)-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346F883
(2Fe-2S)-binding domain-containing protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9022..10491
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PVW7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42518.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
6-hydroxynicotinate reductase
|
|
SCNpilot_cont_1000_bf_scaffold_616_12
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10488..11402
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YLG0_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR02612.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein; K09740 hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11395..11979
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FBBE71
Uncharacterized protein {ECO:0000313|EMBL:EKS41749.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11976..12560
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQG5_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41750.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12676..13107
|
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IAP3_9BRAD
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:ERF80615.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative branched-chain amino acid ABC transporter periplasmic substrate-binding protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_16
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13073..13732
|
Putative branched-chain amino acid ABC transporter, periplasmic substrate-binding protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RQ34_9BRAD
Putative branched-chain amino acid ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CCD84061.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13856..15745
|
Branched-chain amino acid transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H841_9BRAD
ABC transporter permease {ECO:0000313|EMBL:KJC60802.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
|
|
SCNpilot_cont_1000_bf_scaffold_616_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15742..16533
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNX3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42524.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_19
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16530..17234
|
Putative high-affinity branched-chain amino acid transport ATP-binding protein (LivF) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RQ37_9BRAD
rbh
Putative high-affinity branched-chain amino acid transport ATP-binding protein (LivF) {ECO:0000313|EMBL:CCD84064.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
livF; high-affinity branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_20
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17291..17749
|
Transcriptional regulator n=2 Tax=Rhizobiales RepID=I2QAN6_9BRAD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EIG56842.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
|
|
SCNpilot_cont_1000_bf_scaffold_616_21
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17802..18764)
|
Serine/threonine-protein kinase HipA n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IBC6_9BRAD
rbh
Acetylhydrolase {ECO:0000313|EMBL:KJC51752.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
putative alpha/beta hydrolase R526
|
|
SCNpilot_cont_1000_bf_scaffold_616_22
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18862..20061)
|
hypothetical protein; K15358 enamidase [EC:3.5.2.18]
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKJ3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08362.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
|
|
SCNpilot_cont_1000_bf_scaffold_616_23
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20255..21028
|
mvrA; ferredoxin NADP+ reductase; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
ferredoxin--NADP reductase n=1 Tax=Afipia birgiae RepID=UPI0002ED903C
Ferredoxin-NADP reductase {ECO:0000313|EMBL:KJC52623.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
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SCNpilot_cont_1000_bf_scaffold_616_24
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21425..22618
|
hypothetical protein n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002556B6D
rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA10626.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_616_25
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22837..23730)
|
Putative HTH-type transcriptional regulator YcjZ n=2 Tax=Oligotropha carboxidovorans RepID=B6JF38_OLICO
LysR family transcriptional regulator
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI06984.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_1000_bf_scaffold_616_26
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23874..24818
|
Alpha/beta superfamily hydrolase n=2 Tax=Oligotropha carboxidovorans RepID=B6JF37_OLICO
rbh
putative hydrolase; K06889
rbh
Putative hydrolase {ECO:0000313|EMBL:AEI06985.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_1000_bf_scaffold_616_27
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24880..25848
|
Alpha/beta superfamily hydrolase n=2 Tax=Oligotropha carboxidovorans RepID=B6JF36_OLICO
rbh
alpha/beta superfamily hydrolase; K06889
rbh
Putative hydrolase {ECO:0000313|EMBL:AEI06986.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_1000_bf_scaffold_616_28
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25904..26266
|
NAD-dependent epimerase/dehydratase n=2 Tax=Oligotropha carboxidovorans RepID=B6JF35_OLICO
NAD-dependent epimerase/dehydratase
Putative oxidoreductase {ECO:0000313|EMBL:AEI06987.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_1000_bf_scaffold_616_trna_1
unknown
|
Not on your lists |
comp(26586..26659)
|
transferRNA
|
|
SCNpilot_cont_1000_bf_scaffold_616_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26820..27872)
|
Polysaccharide deacetylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNW5_NITHX
rbh
polysaccharide deacetylase
rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ABE62082.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|