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SCNpilot_cont_1000_bf_scaffold_617

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_617_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..843
DNA (843bp) protein (281aa)
Hydroxyacylglutathione hydrolase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GSD1_9BRAD
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:ERF80502.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
beta-lactamase-like
SCNpilot_cont_1000_bf_scaffold_617_2
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

803..1402
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MPV3_9RHIZ
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ETR76254.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
putative protein tyrosine phosphatase
SCNpilot_cont_1000_bf_scaffold_617_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1488..2252)
DNA (765bp) protein (255aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Cobalamin synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132B1_RHOPS
SCNpilot_cont_1000_bf_scaffold_617_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2249..3307)
DNA (1059bp) protein (353aa)
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] rbh
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210A3_RHOPB rbh
SCNpilot_cont_1000_bf_scaffold_617_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3653..4216
DNA (564bp) protein (188aa)
cobalbumin biosynthesis enzyme; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Adenosylcobinamide kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210A4_RHOPB
Bifunctional cobinamide kinase, cobinamide phosphate guanylyltransferase protein {ECO:0000313|EMBL:CAE26158.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_1000_bf_scaffold_617_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4213..4650
DNA (438bp) protein (146aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
cobinamide adenolsyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B5B1A8
Cobinamide adenolsyltransferase {ECO:0000313|EMBL:KIZ46876.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_1000_bf_scaffold_617_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4668..6134
DNA (1467bp) protein (489aa)
cobyric acid synthase; K02232 adenosylcobyric acid synthase [EC:6.3.5.10]
Cobyric acid synthase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J263_RHOP2
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_1000_bf_scaffold_617_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6107..7075)
DNA (969bp) protein (323aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
Cobalamin biosynthesis protein CobD n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210A7_RHOPB
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_1000_bf_scaffold_617_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7077..7949)
DNA (873bp) protein (291aa)
Periplasmic binding protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J265_RHOP2
Iron ABC transporter {ECO:0000313|EMBL:ETR76264.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_617_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7977..8963
DNA (987bp) protein (329aa)
Aminotransferase {ECO:0000313|EMBL:ABD89278.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABD89278.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Aminotransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210A8_RHOPB
class I and II aminotransferase
SCNpilot_cont_1000_bf_scaffold_617_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8975..9754)
DNA (780bp) protein (260aa)
ABC transporter-like protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D894EA rbh
ABC transporter {ECO:0000313|EMBL:KJC39089.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_1000_bf_scaffold_617_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9751..10776)
DNA (1026bp) protein (342aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI000366239B
ABC transporter permease {ECO:0000313|EMBL:KIZ36165.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
transport system permease; K02015 iron complex transport system permease protein
SCNpilot_cont_1000_bf_scaffold_617_13
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10770..12734)
DNA (1965bp) protein (655aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E79A71 rbh
TonB-denpendent receptor {ECO:0000313|EMBL:ETR76268.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_1000_bf_scaffold_617_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13129..13371)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D75_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD85661.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_1000_bf_scaffold_617_15
unknown

Not on your lists

13726..13875
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_617_16
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13987..15201
DNA (1215bp) protein (405aa)
major facilitator transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031D6741
Multidrug efflux transporter MdtA {ECO:0000313|EMBL:ERF80495.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
major facilitator transporter
SCNpilot_cont_1000_bf_scaffold_617_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15246..16529)
DNA (1284bp) protein (428aa)
Possible hexuronate transporter n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N0F4_RHOPA
hexuronate transporter
Possible hexuronate transporter {ECO:0000313|EMBL:CAE30248.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_1000_bf_scaffold_617_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16722..17375
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJY7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41866.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_617_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17372..19837
DNA (2466bp) protein (822aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGS9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29707.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_617_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19827..20915
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKR9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29706.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_617_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20988..22199)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZ63_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33734.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_617_22
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22458..23555)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00038220CD
Putative uncharacterized protein {ECO:0000313|EMBL:EHH09189.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_617_23
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23552..25207)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RAT3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKS70694.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_617_24
unknown

Not on your lists

comp(25207..25380)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_617_25
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25377..26768)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJV7_BEII9
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43322.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_617_26
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26765..27610)
DNA (846bp) protein (282aa)
Glycosyl transferase, family 2 n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3I907_BACTU
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EEM93317.1}; TaxID=527019 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis IBL 200.;"
carbon starvation protein A
SCNpilot_cont_1000_bf_scaffold_617_27
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27767..29140
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLC6_9BACT
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43323.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
glycoside hydrolase family protein
SCNpilot_cont_1000_bf_scaffold_617_28
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29302..30474
DNA (1173bp) protein (391aa)
Glycosyltransferase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2ISR4_9BURK
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43324.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative glycosyltransferase CpsG
SCNpilot_cont_1000_bf_scaffold_617_29
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30559..31818
DNA (1260bp) protein (420aa)
Polysaccharide biosynthesis protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UG58_METS4
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43325.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
polysaccharide biosynthesis protein
SCNpilot_cont_1000_bf_scaffold_617_30
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31815..33011
DNA (1197bp) protein (399aa)
glycosyl transferase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7C4_9THEO
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43612.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Displaying items 1-30 of 43 in total

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