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SCNpilot_cont_1000_bf_scaffold_634

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_634_1
unknown

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_634_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

447..1133
DNA (687bp) protein (229aa)
UPI0003CFF785 related cluster n=1 Tax=unknown RepID=UPI0003CFF785
Uncharacterized protein {ECO:0000313|EMBL:ESZ04441.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transcriptional regulator; K07497 putative transposase
SCNpilot_cont_1000_bf_scaffold_634_3
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1383..2585)
DNA (1203bp) protein (401aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FML3_9RHIZ rbh
SCNpilot_cont_1000_bf_scaffold_634_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2730..4823
DNA (2094bp) protein (698aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
UvrD/REP helicase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV26_9RHIZ rbh
SCNpilot_cont_1000_bf_scaffold_634_5
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4845..5330)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HUI6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN06276.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
SCNpilot_cont_1000_bf_scaffold_634_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5444..5806)
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ18649.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_1000_bf_scaffold_634_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6099..7622
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QIR3_BREDI
Nucleotidyltransferase protein {ECO:0000313|EMBL:CDN94486.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
putative nucleotidyltransferase; K14161 protein ImuB
SCNpilot_cont_1000_bf_scaffold_634_8
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7619..10723
DNA (3105bp) protein (1035aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7]
Error-prone DNA polymerase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHS3_BREDI
SCNpilot_cont_1000_bf_scaffold_634_9
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10910..11797)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003822343 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHJ53314.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
transcriptional regulator, LysR family rbh
SCNpilot_cont_1000_bf_scaffold_634_10
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11898..12944
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037F23F3 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KEC77598.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
putative Zn-dependent alcohol dehydrogenase rbh
SCNpilot_cont_1000_bf_scaffold_634_11
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12931..13611
DNA (681bp) protein (227aa)
Anti-ECFsigma factor, ChrR n=3 Tax=Rhizobium meliloti RepID=F6ECA9_SINMK rbh
Cupin {ECO:0000313|EMBL:KHJ53311.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_634_12
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13628..14749
DNA (1122bp) protein (374aa)
Amine oxidase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q4B9_9RHIZ rbh
Amine oxidase {ECO:0000313|EMBL:KEC77600.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
amine oxidase protein
SCNpilot_cont_1000_bf_scaffold_634_13
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15052..15828)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YB17_MESOW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH85423.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_1000_bf_scaffold_634_14
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16111..16809)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SN04_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA06337.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_1000_bf_scaffold_634_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16839..17099)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JGZ8_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06033.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_634_16
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17110..18174)
DNA (1065bp) protein (355aa)
UPI0003CF5A9E related cluster n=1 Tax=unknown RepID=UPI0003CF5A9E rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14531.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_634_17
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18581..19777
DNA (1197bp) protein (399aa)
UPI0003CFAF38 related cluster n=1 Tax=unknown RepID=UPI0003CFAF38
Uncharacterized protein {ECO:0000313|EMBL:EXL04900.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_634_18
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20099..20281
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NP37_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF41140.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_1000_bf_scaffold_634_19
unknown

Not on your lists

20413..20649
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_634_20
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20646..20849
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJK3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ14613.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_1000_bf_scaffold_634_21
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21032..23176
DNA (2145bp) protein (715aa)
UPI0003CE0711 related cluster n=1 Tax=unknown RepID=UPI0003CE0711
DNA-binding protein {ECO:0000313|EMBL:EXL04896.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
ParB-like nuclease; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_cont_1000_bf_scaffold_634_22
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23252..23728
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11N77_MESSB
Uncharacterized protein {ECO:0000313|EMBL:EXL04895.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_634_23
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23813..24205
DNA (393bp) protein (131aa)
UPI0003D00BDD related cluster n=1 Tax=unknown RepID=UPI0003D00BDD
Uncharacterized protein {ECO:0000313|EMBL:EZQ14524.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_634_24
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24321..24512
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLG1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ14611.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_1000_bf_scaffold_634_25
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24675..24968
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIX4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16370.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_634_26
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25229..25681
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CF92_METED
Uncharacterized protein {ECO:0000313|EMBL:EZQ14610.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_634_27
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25678..27462
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CEF3_METED rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14609.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_634_28
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27502..28164
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CEF2_METED rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14522.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_634_29
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28278..28907
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMK2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14521.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_634_30
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28891..29328
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7Z4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ14608.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Displaying items 1-30 of 46 in total

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