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SCNpilot_cont_1000_bf_scaffold_734

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_734_1
unknown

Not on your lists

3..125
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_734_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159..437)
DNA (279bp) protein (93aa)
UPI0003CFEC11 related cluster n=1 Tax=unknown RepID=UPI0003CFEC11
Integration host factor {ECO:0000313|EMBL:ESZ15255.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hns; HNS-type DNA binding protein; K03530 DNA-binding protein HU-beta
SCNpilot_cont_1000_bf_scaffold_734_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(519..935)
DNA (417bp) protein (139aa)
UPI0003CF37C6 related cluster n=1 Tax=unknown RepID=UPI0003CF37C6
Uncharacterized protein {ECO:0000313|EMBL:EZQ14640.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_1000_bf_scaffold_734_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(932..1612)
DNA (681bp) protein (227aa)
UPI0003CE939B related cluster n=1 Tax=unknown RepID=UPI0003CE939B rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14639.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
parA; chromosome partitioning protein; K03496 chromosome partitioning protein
SCNpilot_cont_1000_bf_scaffold_734_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2064..2471
DNA (408bp) protein (136aa)
UPI0003D06969 related cluster n=1 Tax=unknown RepID=UPI0003D06969
Uncharacterized protein {ECO:0000313|EMBL:EXL04959.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_cont_1000_bf_scaffold_734_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2468..4321
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F9W6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14637.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_734_7
unknown

Not on your lists

comp(4167..4571)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_734_8
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4692..5183)
DNA (492bp) protein (164aa)
N-acetyltransferase GCN5 n=1 Tax=Xanthomonas axonopodis RepID=UPI0002DA7A51
Uncharacterized protein {ECO:0000313|EMBL:CEH59357.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_734_9
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5180..5470)
DNA (291bp) protein (97aa)
Putative DNA-binding protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RPP7_XANCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEH59363.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
SCNpilot_cont_1000_bf_scaffold_734_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5590..7740)
DNA (2151bp) protein (717aa)
UPI0003CE343C related cluster n=1 Tax=unknown RepID=UPI0003CE343C rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14636.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
TRAG family protein; K03205 type IV secretion system protein VirD4
SCNpilot_cont_1000_bf_scaffold_734_11
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7757..8782)
DNA (1026bp) protein (342aa)
UPI0003CED436 related cluster n=1 Tax=unknown RepID=UPI0003CED436 rbh
Type VI secretion protein {ECO:0000313|EMBL:EXL04877.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11
SCNpilot_cont_1000_bf_scaffold_734_12
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8779..10248)
DNA (1470bp) protein (490aa)
UPI0003CDD521 related cluster n=1 Tax=unknown RepID=UPI0003CDD521 rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EZQ14593.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
conjugal transfer protein; K03195 type IV secretion system protein VirB10
SCNpilot_cont_1000_bf_scaffold_734_13
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10251..11054)
DNA (804bp) protein (268aa)
UPI0003CE7DEE related cluster n=1 Tax=unknown RepID=UPI0003CE7DEE rbh
Conjugal transfer protein {ECO:0000313|EMBL:EZQ14592.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
virB9; type IV secretion protein VirB9; K03204 type IV secretion system protein VirB9
SCNpilot_cont_1000_bf_scaffold_734_14
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11051..11803)
DNA (753bp) protein (251aa)
VirB8 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJA4_9RHIZ rbh
Type VI secretion protein {ECO:0000313|EMBL:EZQ14591.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
VirB8; K03203 type IV secretion system protein VirB8
SCNpilot_cont_1000_bf_scaffold_734_15
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11845..12885)
DNA (1041bp) protein (347aa)
UPI0003CF5521 related cluster n=1 Tax=unknown RepID=UPI0003CF5521 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14635.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
conjugal transfer protein; K03201 type IV secretion system protein VirB6
SCNpilot_cont_1000_bf_scaffold_734_16
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12882..13085)
DNA (204bp) protein (68aa)
UPI0003CFFC39 related cluster n=1 Tax=unknown RepID=UPI0003CFFC39
Uncharacterized protein {ECO:0000313|EMBL:EZQ14634.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_1000_bf_scaffold_734_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13092..13826)
DNA (735bp) protein (245aa)
UPI0003CF61F7 related cluster n=1 Tax=unknown RepID=UPI0003CF61F7 rbh
Conjugal transfer protein {ECO:0000313|EMBL:EZQ14590.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_734_18
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13836..14990)
DNA (1155bp) protein (385aa)
UPI0003D02930 related cluster n=1 Tax=unknown RepID=UPI0003D02930 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14633.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
transglycosylase
SCNpilot_cont_1000_bf_scaffold_734_19
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14974..17376)
DNA (2403bp) protein (801aa)
UPI0003CDEDDC related cluster n=1 Tax=unknown RepID=UPI0003CDEDDC rbh
Type VI secretion protein {ECO:0000313|EMBL:EZQ14589.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
avhB4a; type IV secretion protein; K03199 type IV secretion system protein VirB4 rbh
SCNpilot_cont_1000_bf_scaffold_734_20
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17373..17666)
DNA (294bp) protein (98aa)
UPI0003CFCD89 related cluster n=1 Tax=unknown RepID=UPI0003CFCD89
Type VI secretion protein {ECO:0000313|EMBL:EZQ14588.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_1000_bf_scaffold_734_21
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17671..17982)
DNA (312bp) protein (104aa)
UPI0003D015A5 related cluster n=1 Tax=unknown RepID=UPI0003D015A5
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EXL04870.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
conjugal transfer protein trbc; K03197 type IV secretion system protein VirB2
SCNpilot_cont_1000_bf_scaffold_734_22
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17998..18666)
DNA (669bp) protein (223aa)
UPI0003D00809 related cluster n=1 Tax=unknown RepID=UPI0003D00809
Lytic transglycosylase {ECO:0000313|EMBL:EZQ14586.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Membrane-bound lytic murein transglycosylase F Murein lyase F
SCNpilot_cont_1000_bf_scaffold_734_23
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18757..19377
DNA (621bp) protein (207aa)
UPI0003CE4585 related cluster n=1 Tax=unknown RepID=UPI0003CE4585
Uncharacterized protein {ECO:0000313|EMBL:EXL04953.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_cont_1000_bf_scaffold_734_24
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19367..19921
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFL6_9RHIZ
Succinoglycan biosynthesis protein exoI {ECO:0000313|EMBL:EXL04868.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
succinoglycan biosynthesis protein ExoI-like protein
SCNpilot_cont_1000_bf_scaffold_734_25
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19918..20169
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:EZQ14631.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_1000_bf_scaffold_734_26
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20166..20477)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJB1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16501.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_1000_bf_scaffold_734_27
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21156..21641)
DNA (486bp) protein (162aa)
UPI0003CE20A6 related cluster n=1 Tax=unknown RepID=UPI0003CE20A6
Uncharacterized protein {ECO:0000313|EMBL:EZQ14583.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_734_28
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21768..22355
DNA (588bp) protein (196aa)
UPI0003CEF907 related cluster n=1 Tax=unknown RepID=UPI0003CEF907
Uncharacterized protein {ECO:0000313|EMBL:ESY73447.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
conserved exported protein of unknown function
SCNpilot_cont_1000_bf_scaffold_734_29
unknown

Not on your lists

22561..22860
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_734_30
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22821..23249)
DNA (429bp) protein (143aa)
VapC ribonuclease R02377 (EC:3.1.-.-)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
Ribonuclease VapC n=5 Tax=Rhizobium meliloti RepID=F6BMK6_SINMB
Displaying items 1-30 of 34 in total

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