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SCNpilot_cont_1000_bf_scaffold_780

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_780_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(313..1620)
DNA (1308bp) protein (436aa)
integral membrane sensor signal transduction histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] rbh
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE83_XANP2 rbh
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABS66326.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_1000_bf_scaffold_780_2
bacterium YEK0313, Bacteria

Not on your lists

comp(1617..2318)
DNA (702bp) protein (234aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QEV6_METSZ rbh
Transcriptional regulatory protein QseB {ECO:0000313|EMBL:CEJ15003.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
two component transcriptional regulator, winged helix family rbh
SCNpilot_cont_1000_bf_scaffold_780_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2396..4180
DNA (1785bp) protein (595aa)
protein-disulfide reductase (EC:1.8.1.8); K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] rbh
Protein-disulfide reductase {ECO:0000313|EMBL:ADH88556.1}; EC=1.8.1.8 {ECO:0000313|EMBL:ADH88556.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Protein-disulfide reductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A883_STAND rbh
SCNpilot_cont_1000_bf_scaffold_780_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4206..4847
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E8DD0
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ABS66323.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_1000_bf_scaffold_780_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4844..5569
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003771331
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ADH88554.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_1000_bf_scaffold_780_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5807..6586)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X083_9SPHN rbh
hypothetical protein; K07090 rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ70090.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_1000_bf_scaffold_780_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..7040)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3C5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK52521.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K07112
SCNpilot_cont_1000_bf_scaffold_780_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7042..7470)
DNA (429bp) protein (143aa)
YeeE/YedE family protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003726ADD
Putative uncharacterized protein {ECO:0000313|EMBL:EHK52520.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
YeeE/YedE family protein; K07112
SCNpilot_cont_1000_bf_scaffold_780_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7467..7859)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00035D56FE
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADH88303.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_1000_bf_scaffold_780_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7864..8754)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3C2_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK52518.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_780_11
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8762..9394)
DNA (633bp) protein (211aa)
peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Peroxiredoxin {ECO:0000313|EMBL:ACB95563.1}; EC=1.11.1.15 {ECO:0000313|EMBL:ACB95563.1};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Peroxiredoxin n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IEG5_BEII9
SCNpilot_cont_1000_bf_scaffold_780_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9391..9816)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1B6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53278.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_780_13
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9818..10024)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003807258
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH88305.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_1000_bf_scaffold_780_14
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10143..11375
DNA (1233bp) protein (411aa)
Oxidoreductase n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VJ45_9PROT rbh
Oxidoreductase {ECO:0000313|EMBL:GAN76982.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_cont_1000_bf_scaffold_780_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11617..12105
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHI4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42122.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome c, class I
SCNpilot_cont_1000_bf_scaffold_780_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12102..13049
DNA (948bp) protein (316aa)
cytochrome C n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000345AD30
Uncharacterized protein {ECO:0000313|EMBL:EKS42123.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome c, class I
SCNpilot_cont_1000_bf_scaffold_780_17
unknown

Not on your lists

comp(13061..13261)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_780_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13339..14262
DNA (924bp) protein (308aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
cytochrome C oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit 2 n=1 Tax=alpha proteobacterium RS24 RepID=U2W9V2_9PROT
SCNpilot_cont_1000_bf_scaffold_780_19
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14297..15877
DNA (1581bp) protein (527aa)
cytochrome C oxidase subunit I n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4F684
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:KGM34977.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
coxA2; cytochrome c oxidase, subunit I
SCNpilot_cont_1000_bf_scaffold_780_20
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16477..17484)
DNA (1008bp) protein (336aa)
cytochrome d ubiquinol oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-] rbh
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U5U9_SINMW rbh
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:ABR59029.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_1000_bf_scaffold_780_21
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17490..18896)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003696053 rbh
Cytochrome D ubiquinol oxidase subunit I {ECO:0000313|EMBL:KKB12427.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
qxtA; quinol oxidase subunit I transmembrane protein
SCNpilot_cont_1000_bf_scaffold_780_22
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19870..20400
DNA (531bp) protein (177aa)
Integrase n=2 Tax=Mesorhizobium RepID=V7FUT7_9RHIZ
Integrase {ECO:0000313|EMBL:ESY10646.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_780_23
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20362..20799)
DNA (438bp) protein (146aa)
CopG family transcripitonal regulator n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HG21_9RHIZ
CopG family transcripitonal regulator {ECO:0000313|EMBL:ESX86576.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_780_24
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20807..21388)
DNA (582bp) protein (194aa)
Conjugal transfer protein TraG n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPV4_9SPHN
Conjugal transfer protein TraG {ECO:0000313|EMBL:EQA99588.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
virD4; type IV secretory pathway VirD4 component; K03205 type IV secretion system protein VirD4
Displaying 24 items

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