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SCNpilot_cont_1000_bf_scaffold_781

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_781_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14..949)
DNA (936bp) protein (312aa)
Putative Zinc-binding dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVL1_9BRAD rbh
Oxidoreductase {ECO:0000313|EMBL:KIZ40671.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
putative Zinc-binding dehydrogenase
SCNpilot_cont_1000_bf_scaffold_781_2
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1057..1527
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I7V6_RHOVT
Uncharacterized protein {ECO:0000313|EMBL:KAI94594.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_781_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1521..1985)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000372EEDA
DNA-binding protein with PD1-like DNA-binding motif {ECO:0000313|EMBL:KGT74510.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein; K06934
SCNpilot_cont_1000_bf_scaffold_781_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1993..2322)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YHK7_9BRAD
Ferredoxin {ECO:0000313|EMBL:KIZ40670.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_781_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2516..3214
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036BC20D
Uncharacterized protein {ECO:0000313|EMBL:KIZ40668.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_781_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3310..3498)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK08_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIZ40667.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_781_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3545..4063)
DNA (519bp) protein (173aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF37_NITHX
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABE65160.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_781_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4051..4341)
DNA (291bp) protein (97aa)
CopG-like DNA-binding n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF38_NITHX
CopG family transcriptional regulator {ECO:0000313|EMBL:KIZ40666.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
CopG-like DNA-binding
SCNpilot_cont_1000_bf_scaffold_781_9

Not on your lists

comp(4526..7450)
DNA (2925bp) protein (975aa)
Uncharacterized protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4MP76_CLOTM rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD55596.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA/RNA helicase, superfamily II rbh
SCNpilot_cont_1000_bf_scaffold_781_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7716..8975
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFC7_NITHX
Uncharacterized protein {ECO:0000313|EMBL:CEG10433.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_781_11
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9088..10221)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H1W4_GLUDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAP54069.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_1000_bf_scaffold_781_12
Acetobacter indonesiensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10329..11549
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H1W1_GLUDA rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN64666.1}; TaxID=1231340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter indonesiensis 5H-1.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_781_13
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11546..13270
DNA (1725bp) protein (575aa)
Putative Ubiquitin-activating enzyme n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H1V9_GLUDA rbh
ubiquitin-activating enzyme rbh
Putative Ubiquitin-activating enzyme {ECO:0000313|EMBL:CAP54067.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_1000_bf_scaffold_781_14
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13335..13703
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H1V6_GLUDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP54066.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_1000_bf_scaffold_781_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14068..15264)
DNA (1197bp) protein (399aa)
Putative transcriptional regulator n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHE1_BEII9
putative transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_1000_bf_scaffold_781_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15337..16557)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEN6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KIZ39790.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_781_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16747..16944)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BRB5_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08359.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_781_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17068..17346
DNA (279bp) protein (93aa)
Prevent-host-death family protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJZ5_OLICO
hypothetical protein
Prevent-host-death family protein {ECO:0000313|EMBL:CEG10446.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_1000_bf_scaffold_781_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17343..17780
DNA (438bp) protein (146aa)
Ribonuclease VapC n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBU9_METED
putative plasmid stability protein; K07062
Putative plasmid stability protein {ECO:0000313|EMBL:AEI08361.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_1000_bf_scaffold_781_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17777..18868
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBU8_METED
Uncharacterized protein {ECO:0000313|EMBL:ETR79463.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_781_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18877..20046
DNA (1170bp) protein (390aa)
integrase n=1 Tax=Afipia birgiae RepID=UPI0002F1A3C1 rbh
Integrase {ECO:0000313|EMBL:ETR79462.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
integrase/recombinase protein
SCNpilot_cont_1000_bf_scaffold_781_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20335..21513
DNA (1179bp) protein (393aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFW1_NITHX rbh
cobyrinic acid a,c-diamide synthase rbh
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ABE64886.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_781_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21474..22391
DNA (918bp) protein (306aa)
ParB family protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFW2_NITHX
RepB plasmid partition
ParB family protein {ECO:0000313|EMBL:ABE64885.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_781_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22648..22989
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWQ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32929.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
replication initiation protein RepC
Displaying 24 items

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