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SCNpilot_cont_1000_bf_scaffold_853

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_853_1
bacterium YEK0313, Bacteria

Not on your lists

comp(3..617)
DNA (615bp) protein (205aa)
acetolactate synthase; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
acetolactate synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000318F796
Acetolactate synthase, catabolic {ECO:0000313|EMBL:CEJ11361.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_1000_bf_scaffold_853_2
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(694..1548)
DNA (855bp) protein (285aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] rbh
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Rhizobium meliloti RepID=UPI00031388C7 rbh
SCNpilot_cont_1000_bf_scaffold_853_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1545..2687)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFL4_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP54519.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_853_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2645..3157)
DNA (513bp) protein (171aa)
MerR family transcriptional regulator n=1 Tax=Aureimonas ureilytica RepID=UPI00036A8C81
MerR family transcriptional regulator {ECO:0000313|EMBL:EXL02269.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
MerR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_853_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3255..6431)
DNA (3177bp) protein (1059aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFL2_RHIRD rbh
Hydrophobe/amphiphile efflux-1 (HAE1) family protein {ECO:0000313|EMBL:EGP54517.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
SCNpilot_cont_1000_bf_scaffold_853_6
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6428..7675)
DNA (1248bp) protein (416aa)
Transporter n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X0R6_9RHIZ rbh
Transporter {ECO:0000313|EMBL:ERI14404.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
RND family efflux transporter MFP subunit rbh
SCNpilot_cont_1000_bf_scaffold_853_7
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7959..10724)
DNA (2766bp) protein (922aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] rbh
Heavy metal translocating P-type ATPase n=3 Tax=Proteobacteria RepID=B7V4Z9_PSEA8 rbh
ATPase {ECO:0000313|EMBL:EXL02266.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_1000_bf_scaffold_853_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10879..11289)
DNA (411bp) protein (137aa)
Transcriptional regulator, ArsR family (Modular protein) n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBV9_9RHIZ
Transcriptional regulator, ArsR family (Modular protein) {ECO:0000313|EMBL:CCV13920.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
regulatory protein ArsR
SCNpilot_cont_1000_bf_scaffold_853_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11552..11815
DNA (264bp) protein (88aa)
Glutaredoxin n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X6A1_OCHA4
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:ABS16755.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_1000_bf_scaffold_853_10
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11827..12846
DNA (1020bp) protein (340aa)
Oxidoreductase FAD/NAD(P)-binding subunit n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK6_RHIRD rbh
Oxidoreductase {ECO:0000313|EMBL:EXL02263.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
ndoR; oxidoreductase FAD-binding subunit rbh
SCNpilot_cont_1000_bf_scaffold_853_11
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12911..13420)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7GNJ1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AJE48495.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_853_12
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13486..14961)
DNA (1476bp) protein (492aa)
Multicopper oxidase type 2 n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK5_RHIRD rbh
Multicopper oxidase type 2 {ECO:0000313|EMBL:EGP54510.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
multicopper oxidase type 2
SCNpilot_cont_1000_bf_scaffold_853_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15089..15481)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK4_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EYR82886.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_853_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15496..15690)
DNA (195bp) protein (65aa)
Heavy metal transport/detoxification protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK3_RHIRD
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EGP54508.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
heavy metal transport/detoxification protein; K07213 copper chaperone
SCNpilot_cont_1000_bf_scaffold_853_15
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15851..18592
DNA (2742bp) protein (914aa)
Heavy metal translocating P-type ATPase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK2_RHIRD rbh
ATPase {ECO:0000313|EMBL:EXL02259.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
heavy metal translocating p-type ATPase rbh
SCNpilot_cont_1000_bf_scaffold_853_16
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18651..19100
DNA (450bp) protein (150aa)
transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI000372DA43
Transcriptional regulator {ECO:0000313|EMBL:EXL02258.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
MerR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_853_17
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19147..20475)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE20_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:BAO30271.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_853_18
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20478..21461)
DNA (984bp) protein (328aa)
Major facilitator transporter n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK0_RHIRD
MFS transporter {ECO:0000313|EMBL:EXL02257.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
major facilitator superfamily protein
SCNpilot_cont_1000_bf_scaffold_853_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21607..21882
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFJ9_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP54504.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_853_20
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21934..22527
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFJ8_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP54503.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_853_21
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22506..23006
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037467EF
Uncharacterized protein {ECO:0000313|EMBL:EXL02254.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_853_22
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23046..23576)
DNA (531bp) protein (177aa)
major facilitator transporter n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000363318F
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABR64354.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_1000_bf_scaffold_853_23
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23623..24177)
DNA (555bp) protein (185aa)
UPI0003CE5C2B related cluster n=1 Tax=unknown RepID=UPI0003CE5C2B
Major facilitator transporter {ECO:0000313|EMBL:ESZ15980.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
H+ Antiporter protein
SCNpilot_cont_1000_bf_scaffold_853_24
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24189..24470)
DNA (282bp) protein (94aa)
UPI0003CE59A7 related cluster n=1 Tax=unknown RepID=UPI0003CE59A7
Nickel-resistant pritein NirB {ECO:0000313|EMBL:ESY73943.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein; K07807 hypothetical protein NreA
SCNpilot_cont_1000_bf_scaffold_853_25
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24572..25051)
DNA (480bp) protein (160aa)
Cytochrome B561 n=1 Tax=Nitratireductor indicus C115 RepID=K2PGQ6_9RHIZ
Membrane protein {ECO:0000313|EMBL:EZQ14946.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
transmembrane cytochrome b562
SCNpilot_cont_1000_bf_scaffold_853_26
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25144..26079)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QF14_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP10354.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_853_27
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26076..26576)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MK1_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61368.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_1000_bf_scaffold_853_28
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26573..27202)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MK0_MESSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG61369.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_1000_bf_scaffold_853_29
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27199..27411)
DNA (213bp) protein (71aa)
CopG-like DNA-binding protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QF11_9BRAD
CopG-like DNA-binding protein {ECO:0000313|EMBL:EGP10351.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_853_30
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27562..28527
DNA (966bp) protein (322aa)
DNA polymerase, beta-like region n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MJ8_MESSB
DNA polymerase, beta-like region
DNA polymerase, beta-like region {ECO:0000313|EMBL:ABG61371.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Displaying items 1-30 of 71 in total

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