name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_bf_scaffold_970_1
unknown
|
Not on your lists |
1..333
|
This feature has no annotations |
|
SCNpilot_cont_1000_bf_scaffold_970_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(347..1429)
|
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKX4_NITHX
|
|
SCNpilot_cont_1000_bf_scaffold_970_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1612..2865
|
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Tyrosine--tRNA ligase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVR0_RHOP2
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_970_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2922..4172
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTY6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41808.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
major facilitator superfamily protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_970_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4251..7862)
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213P1_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD88395.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_1000_bf_scaffold_970_6
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8151..8990
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S5L6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89493.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_970_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9081..10424
|
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IMV5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig178, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47977.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_970_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10632..12710
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HK65_9BRAD
Carbamoyltransferase {ECO:0000313|EMBL:KJC35430.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
Carbamoyltransferase
|
|
SCNpilot_cont_1000_bf_scaffold_970_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12658..13602)
|
DMT superfamily permease n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN16_9BRAD
DMT superfamily permease {ECO:0000313|EMBL:EGP07435.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_970_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13838..14716)
|
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I3E3_9BRAD
Dehydrogenase {ECO:0000313|EMBL:KGT76824.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
dehydrogenase NAD(P)-binding domain-containing protein
|
|
SCNpilot_cont_1000_bf_scaffold_970_11
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14832..15800)
|
Bacterial peptide chain release factor 2 (BRF-2) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EJB3_BRASB
rbh
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2
rbh
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
|
|
SCNpilot_cont_1000_bf_scaffold_970_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15857..18352)
|
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABD88400.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABD88400.1};; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Penicillin-binding protein 1A n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213N6_RHOPB
|
|
SCNpilot_cont_1000_bf_scaffold_970_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18634..19878)
|
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNZ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40093.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_cont_1000_bf_scaffold_970_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20654..21469
|
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Ribonuclease E n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDT5_9BRAD
|
|
SCNpilot_cont_1000_bf_scaffold_970_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22202..23320
|
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ribonuclease; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HL87_9BRAD
|
|
SCNpilot_cont_1000_bf_scaffold_970_16
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23387..24712)
|
C4-dicarboxylate transport protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TD01_9BRAD
rbh
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
dctA; C4-dicarboxylate transport protein; K11103 aerobic C4-dicarboxylate transport protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_970_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24882..26069)
|
Aminotransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137R9_RHOPS
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:KIZ40145.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
class I and II aminotransferase
|
|
SCNpilot_cont_1000_bf_scaffold_970_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26149..27594
|
peptidase M48 Ste24p n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003626417
Bradyrhizobium elkanii strain UASWS1015 Contig178, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47959.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
peptidase M48 Ste24p
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_970_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27634..28401
|
DSBA oxidoreductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLB9_NITHX
DSBA oxidoreductase {ECO:0000313|EMBL:KIZ37594.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
DSBA oxidoreductase
|
|
SCNpilot_cont_1000_bf_scaffold_970_20
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28584..29039
|
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
3-dehydroquinate dehydratase; K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYR0_9BRAD
|
|
SCNpilot_cont_1000_bf_scaffold_970_21
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29084..29572
|
Acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit {ECO:0000313|EMBL:CCD89521.1}; EC=6.4.1.2 {ECO:0000313|EMBL:CCD89521.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit (EC:6.4.1.2); K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
acetyl-CoA carboxylase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037BBA46
|
|
SCNpilot_cont_1000_bf_scaffold_970_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29636..30817
|
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A87BE
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ADU44655.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
|
|
SCNpilot_cont_1000_bf_scaffold_970_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31029..32495
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG37_9BRAD
multi-sensor signal transduction histidine kinase
|
|
SCNpilot_cont_1000_bf_scaffold_970_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32492..32932
|
Response regulator receiver domain protein (CheY-like) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLB4_NITHX
response regulator receiver domain-containing protein
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABE62983.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_cont_1000_bf_scaffold_970_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32929..34020
|
Signal transduction histidine kinase {ECO:0000313|EMBL:ABD88420.1}; EC=2.7.3.- {ECO:0000313|EMBL:ABD88420.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Signal transduction histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213L6_RHOPB
signal transduction histidine kinase
|
|
SCNpilot_cont_1000_bf_scaffold_970_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34051..34737
|
aat; leucyl/phenylalanyl-tRNA--protein transferase; K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000255|HAMAP-Rule:MF_00688}; EC=2.3.2.6 {ECO:0000255|HAMAP-Rule:MF_00688};; L/F-transferase {ECO:0000255|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000255|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000255|HAMAP-Rule:MF_00688}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=LFTR_RHOP5
|
|
SCNpilot_cont_1000_bf_scaffold_970_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34753..35643)
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMC2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62625.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_cont_1000_bf_scaffold_970_28
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35914..36690
|
oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035E16FF
rbh
Oxidoreductase {ECO:0000313|EMBL:KJC35404.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
putative levodione reductase
|
|
SCNpilot_cont_1000_bf_scaffold_970_29
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36749..37897
|
acetyl hydrolase n=1 Tax=Afipia birgiae RepID=UPI0003059B7B
Lipase/esterase {ECO:0000313|EMBL:EGP08338.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
|
|
SCNpilot_cont_1000_bf_scaffold_970_30
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38214..38447
|
ThiJ/PfpI family protein {ECO:0000313|EMBL:EJZ28433.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
|