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SCNpilot_cont_1000_bf_scaffold_988

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_988_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..765
DNA (765bp) protein (255aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036EB1A4 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC40766.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_988_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

762..1301
DNA (540bp) protein (180aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IS67_9BRAD
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:ERF85624.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_988_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1337..2644
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IBL4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE67281.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_988_4
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2686..3738
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QT35_RALPI
Uncharacterized protein {ECO:0000313|EMBL:AGW93303.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
aminoglycoside phosphotransferase
SCNpilot_cont_1000_bf_scaffold_988_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3738..4931
DNA (1194bp) protein (398aa)
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas sp. GM55 RepID=J2TKU7_9PSED rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIZ44024.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
acyl-CoA dehydrogenase rbh
SCNpilot_cont_1000_bf_scaffold_988_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4978..6624
DNA (1647bp) protein (549aa)
fatty-acid--CoA ligase (EC:6.2.1.-)
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Pseudomonas sp. GM55 RepID=J3GTV2_9PSED
Acyl-CoA synthetase {ECO:0000313|EMBL:KIZ44027.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_1000_bf_scaffold_988_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6621..7370
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DR30_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:KIZ44022.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_988_8
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7559..8755
DNA (1197bp) protein (399aa)
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TTV6_TISMK
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein {ECO:0000313|EMBL:EJZ30933.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein
SCNpilot_cont_1000_bf_scaffold_988_9
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8973..10700)
DNA (1728bp) protein (576aa)
acyl-CoA synthetase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Putative long-chain fatty acid--CoA ligase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9T7_RHOPA
Acyl-CoA synthetase {ECO:0000313|EMBL:EJZ30932.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_1000_bf_scaffold_988_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10825..14007)
DNA (3183bp) protein (1061aa)
Biotin carboxylase {ECO:0000313|EMBL:EGP07830.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EGP07830.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Biotin carboxylase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLH7_9BRAD
pyruvate carboxylase
SCNpilot_cont_1000_bf_scaffold_988_11
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14179..14685
DNA (507bp) protein (169aa)
Putative MarR family transcriptional regulator n=1 Tax=Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 RepID=K6V1D5_ACIRA
MarR family transcriptional regulator {ECO:0000313|EMBL:EJZ30938.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
regulatory helix-turn-helix protein, MarR family protein 22
SCNpilot_cont_1000_bf_scaffold_988_12
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14754..16376
DNA (1623bp) protein (541aa)
AMP-dependent synthetase/ligase (EC:6.2.1.26); K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-] rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABB06165.1}; EC=6.2.1.26 {ECO:0000313|EMBL:ABB06165.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
AMP-dependent synthetase and ligase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39N01_BURS3 rbh
SCNpilot_cont_1000_bf_scaffold_988_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16434..17636)
DNA (1203bp) protein (401aa)
acyl-coenzyme A transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16]
Putative hydroxyproline dehydratase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QK86_9BRAD rbh
Putative hydroxyproline dehydratase {ECO:0000313|EMBL:EGP08255.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_cont_1000_bf_scaffold_988_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17677..18651)
DNA (975bp) protein (325aa)
3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Bradyrhizobiaceae RepID=F7QK88_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31953.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
3-hydroxyacyl-CoA dehydrogenase rbh
SCNpilot_cont_1000_bf_scaffold_988_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18739..19497)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NTZ1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31954.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
acetoacetate decarboxylase rbh
SCNpilot_cont_1000_bf_scaffold_988_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20088..21167
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWZ2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31955.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_988_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21596..22672
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NS53_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31956.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
helix-turn-helix domain-containing protein
SCNpilot_cont_1000_bf_scaffold_988_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22755..23606
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NNN0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31957.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_988_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23675..24115
DNA (441bp) protein (147aa)
Phasin family protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0I4_9BRAD
Phasin family protein {ECO:0000313|EMBL:EKS31958.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_988_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24248..25015
DNA (768bp) protein (256aa)
gluconate 5-dehydrogenase (EC:1.1.1.69); K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NTZ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31959.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_1000_bf_scaffold_988_21
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25053..26768
DNA (1716bp) protein (572aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EGP08264.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EGP08264.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QK95_9BRAD
AMP-dependent synthetase and ligase
SCNpilot_cont_1000_bf_scaffold_988_22
unknown

Not on your lists

26913..27014
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_988_23
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27065..28240
DNA (1176bp) protein (392aa)
Acyltransferase, WS/DGAT/MGAT n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NS58_9BRAD
Acyltransferase, WS/DGAT/MGAT {ECO:0000313|EMBL:EKS31961.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
acyltransferase, WS/DGAT/MGAT
SCNpilot_cont_1000_bf_scaffold_988_24
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28450..29796
DNA (1347bp) protein (449aa)
Major facilitator family transporter n=1 Tax=Comamonas testosteroni S44 RepID=D8DAF5_COMTE
Major facilitator family transporter {ECO:0000313|EMBL:EFI60097.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
ttuB1; putative tartrate transporter TtuB rbh
SCNpilot_cont_1000_bf_scaffold_988_25
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29906..30490
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0I9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31963.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
GCN5-related N-acetyltransferase
SCNpilot_cont_1000_bf_scaffold_988_26
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30515..31309
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NX00_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31965.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
short-chain dehydrogenase/reductase SDR; K07124
SCNpilot_cont_1000_bf_scaffold_988_27
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31357..31881
DNA (525bp) protein (175aa)
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209, ECO:0000313|EMBL:CCJ07511.1}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209, ECO:0000313|EMBL:CCJ07511.1};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
Inorganic pyrophosphatase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QT56_METTR
SCNpilot_cont_1000_bf_scaffold_988_28
bacterium YEK0313, Bacteria

Not on your lists

32030..32941
DNA (912bp) protein (304aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=G3C5T0_9BACT
3-oxoadipate enol-lactonase 2 {ECO:0000313|EMBL:CEJ14610.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
alpha/beta hydrolase fold protein rbh
SCNpilot_cont_1000_bf_scaffold_988_29
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32957..33730
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PCA6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS40242.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_988_30
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34460..35122
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G2X8_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL75115.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
Displaying items 1-30 of 31 in total

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