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SCNpilot_cont_1000_bf_scaffold_994

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_994_1
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..667
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036F6FC5
Putative Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCH76048.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
SC9B10.14; transcriptional regulator; K03710 GntR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_994_2
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(900..1103)
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036E0DD8
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family)
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_994_3
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1379..2497)
DNA (1119bp) protein (373aa)
Glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:CCH74299.1}; EC=4.1.1.70 {ECO:0000313|EMBL:CCH74299.1};; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
Sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3) rbh
glutaconyl-CoA decarboxylase subunit beta n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B60417 rbh
SCNpilot_cont_1000_bf_scaffold_994_4
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2500..3000)
DNA (501bp) protein (167aa)
Putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RT46_PROA4
Putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
Putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit {ECO:0000313|EMBL:AFV88068.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
SCNpilot_cont_1000_bf_scaffold_994_5
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3002..3391)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6W982_9MICO
Sodium pump decarboxylase gamma subunit {ECO:0000313|EMBL:CCH72574.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
OAD_gamma domain-containing protein
SCNpilot_cont_1000_bf_scaffold_994_6
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3395..4939)
DNA (1545bp) protein (515aa)
Putative carboxyl transferase (Putative Propionyl-CoA carboxylase beta chain or putative methylmalonyl caboxyltransferase ) {ECO:0000313|EMBL:CCH72573.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CCH72573.1};; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
Carboxyl transferase (EC:6.4.1.3) rbh
methylmalonyl-CoA carboxyltransferase n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B3A820 rbh
SCNpilot_cont_1000_bf_scaffold_994_7
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5042..6280)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00037B026D rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDO22520.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_cont_1000_bf_scaffold_994_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6273..7688)
DNA (1416bp) protein (472aa)
oxidoreductase FAD-binding protein; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] rbh
Oxidoreductase, FAD-binding protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AU55_STRRD rbh
Oxidoreductase, FAD-binding protein {ECO:0000313|EMBL:ACZ90510.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_1000_bf_scaffold_994_9
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7685..9106)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000375E03C rbh
Glycerol kinase {ECO:0000313|EMBL:CDP88175.1}; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
glycerol kinase rbh
SCNpilot_cont_1000_bf_scaffold_994_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9103..10596)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00037141C2 rbh
Amino acid permease-associated protein {ECO:0000313|EMBL:KGE67186.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
amino acid permease-associated protein rbh
SCNpilot_cont_1000_bf_scaffold_994_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10724..11485)
DNA (762bp) protein (254aa)
Transcriptional regulator, DeoR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AU52_STRRD
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACZ90507.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_1000_bf_scaffold_994_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11815..12843
DNA (1029bp) protein (343aa)
dapB2; dihydrodipicolinate reductase DapB2; K00215 dihydrodipicolinate reductase [EC:1.3.1.26] rbh
Dihydrodipicolinate reductase n=9 Tax=Clostridium RepID=N9WNF4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDF24973.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
SCNpilot_cont_1000_bf_scaffold_994_13
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12973..13473)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000365F94D
Uncharacterized protein {ECO:0000313|EMBL:AIR99916.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_994_14
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13594..14604
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003729160 rbh
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK35369.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_cont_1000_bf_scaffold_994_15
Corynebacterium doosanense, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14614..15024
DNA (411bp) protein (137aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
hypothetical protein n=1 Tax=Corynebacterium doosanense RepID=UPI000382B75E
DNA mismatch repair protein MutT {ECO:0000313|EMBL:AIT61924.1}; TaxID=558173 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium doosanense CAU 212 = DSM 45436.;"
SCNpilot_cont_1000_bf_scaffold_994_16
unknown

Not on your lists

comp(15170..15427)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_994_17
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15604..15888
DNA (285bp) protein (95aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003717E3A
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66559.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
SCNpilot_cont_1000_bf_scaffold_994_18
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15917..16615
DNA (699bp) protein (233aa)
deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4] rbh
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036BFC16 rbh
Displaying 18 items

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