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SCNpilot_cont_1000_bf_scaffold_6248

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_6248_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1274
DNA (1272bp) protein (424aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14]
N-methylhydantoinase B n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IH42_9BRAD
N-methylhydantoinase B {ECO:0000313|EMBL:ERF83040.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_1000_bf_scaffold_6248_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1232..1468
DNA (237bp) protein (79aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14]
N-methylhydantoinase B n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IH42_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46490.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_1000_bf_scaffold_6248_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1471..3513
DNA (2043bp) protein (681aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ABE39600.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ABE39600.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
5-oxoprolinase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003821228 rbh
SCNpilot_cont_1000_bf_scaffold_6248_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3701..4327)
DNA (627bp) protein (209aa)
Long-chain acyl-CoA synthetase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFH2_9BRAD
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:ERF83558.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_6248_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4411..5541
DNA (1131bp) protein (377aa)
Sugar phosphate permease n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WU29_9BRAD
Sugar phosphate permease {ECO:0000313|EMBL:EJN16225.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
major facilitator superfamily protein
SCNpilot_cont_1000_bf_scaffold_6248_6
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5736..6635)
DNA (900bp) protein (300aa)
Enoyl-CoA hydratase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNC2_TISMK rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:AFK54260.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_1000_bf_scaffold_6248_7
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6868..7314
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YKY1_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL74557.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_1000_bf_scaffold_6248_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7489..7785)
DNA (297bp) protein (99aa)
50S ribosomal protein L28 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=RL28_RHOP2
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_1000_bf_scaffold_6248_9
unknown

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7820..8080
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_6248_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8077..8943
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2Q2_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD05258.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_1000_bf_scaffold_6248_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9061..10719
DNA (1659bp) protein (553aa)
Helicase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BW6_RHOPB
helicase-like protein
Helicase-like {ECO:0000313|EMBL:ABD86120.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_1000_bf_scaffold_6248_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10787..12346
DNA (1560bp) protein (520aa)
Helicase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQV3_NITHX
Helicase {ECO:0000313|EMBL:KIZ42154.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
helicase-like protein
SCNpilot_cont_1000_bf_scaffold_6248_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12479..12748
DNA (270bp) protein (90aa)
RNA-binding S4 domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VG54_RHOPX
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15
RNA-binding S4 domain protein {ECO:0000313|EMBL:ADU41778.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_1000_bf_scaffold_6248_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12855..13193
DNA (339bp) protein (113aa)
Ferredoxin n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VG55_RHOPX
ferredoxin; K05524 ferredoxin
Ferredoxin {ECO:0000313|EMBL:ADU41779.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Displaying 14 items

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