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SCNpilot_cont_1000_bf_scaffold_3008

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_3008_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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50..1762
DNA (1713bp) protein (571aa)
ureC; urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5] rbh
Urease subunit alpha {ECO:0000255|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01953};; Urea amidohydrolase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01953}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Urease subunit alpha n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=URE1_MESSB rbh
SCNpilot_cont_1000_bf_scaffold_3008_2
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1770..2261
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F2ED6
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ureE; urease accessory protein UreE
SCNpilot_cont_1000_bf_scaffold_3008_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2200..2937
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003637F33
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
urease accessory protein UreF; K03188 urease accessory protein
SCNpilot_cont_1000_bf_scaffold_3008_4
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2934..3548
DNA (615bp) protein (205aa)
urease accessory protein UreG n=1 Tax=Meganema perideroedes RepID=UPI0003658A56
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
urease accessory protein UreG; K03189 urease accessory protein
SCNpilot_cont_1000_bf_scaffold_3008_5
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3634..4314)
DNA (681bp) protein (227aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.9) rbh
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A3B7F rbh
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:AJX13635.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
SCNpilot_cont_1000_bf_scaffold_3008_6
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4343..5098)
DNA (756bp) protein (252aa)
coenzyme A transferase; K01034 acetate CoA-transferase alpha subunit [EC:2.8.3.8] rbh
CoA transferase n=2 Tax=Ralstonia RepID=E2STB9_9RALS rbh
CoA-transferase {ECO:0000313|EMBL:KFL52941.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
SCNpilot_cont_1000_bf_scaffold_3008_7
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5273..6715)
DNA (1443bp) protein (481aa)
putative N,N-dimethylformamidase; K03418 N,N-dimethylformamidase [EC:3.5.1.56]
large subunit of N,N-dimethylformamidase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A63F8
Putative N,N-dimethylformamidase {ECO:0000313|EMBL:ABM57704.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_1000_bf_scaffold_3008_8
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6739..7488)
DNA (750bp) protein (250aa)
putative N,N-dimethylformamidase; K03418 N,N-dimethylformamidase [EC:3.5.1.56]
large subunit of N,N-dimethylformamidase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000348E66F
Putative N,N-dimethylformamidase {ECO:0000313|EMBL:ABM57704.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_1000_bf_scaffold_3008_9
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7497..7865)
DNA (369bp) protein (123aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H510_METFK
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABE48427.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
SCNpilot_cont_1000_bf_scaffold_3008_10
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7947..10295)
DNA (2349bp) protein (783aa)
N,N-dimethylformamidase; K03418 N,N-dimethylformamidase [EC:3.5.1.56] rbh
large subunit of N,N-dimethylformamidase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000348E66F rbh
Putative N,N-dimethylformamidase {ECO:0000313|EMBL:ABE48429.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
SCNpilot_cont_1000_bf_scaffold_3008_11
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10368..12020)
DNA (1653bp) protein (551aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000344E299 rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:ABM57705.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_1000_bf_scaffold_3008_12
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12026..12907)
DNA (882bp) protein (294aa)
amino acid ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000347981E rbh
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
Inner-membrane translocator {ECO:0000313|EMBL:ABM57706.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_1000_bf_scaffold_3008_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12912..13268)
DNA (357bp) protein (119aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000345BD48
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABD06756.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Displaying 13 items

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