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SCNpilot_cont_1000_bf_scaffold_3169

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_3169_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1980
DNA (1980bp) protein (660aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E79A71
TonB-denpendent receptor {ECO:0000313|EMBL:ETR76268.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_1000_bf_scaffold_3169_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1974..2801
DNA (828bp) protein (276aa)
Transport system permease protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH43_NITHX
transport system permease; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ABE64454.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_3169_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2798..3577
DNA (780bp) protein (260aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D894EA
ABC transporter {ECO:0000313|EMBL:KJC57344.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_1000_bf_scaffold_3169_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3589..4575)
DNA (987bp) protein (329aa)
Aminotransferase {ECO:0000313|EMBL:ABJ06182.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABJ06182.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Aminotransferase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) PF2_RHOP5">RepID=Q07PF2_RHOP5
class I and II aminotransferase; K02225 cobalamin biosynthetic protein CobC
SCNpilot_cont_1000_bf_scaffold_3169_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4603..5478
DNA (876bp) protein (292aa)
Periplasmic binding protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J265_RHOP2
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABD05445.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_1000_bf_scaffold_3169_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5480..6460
DNA (981bp) protein (327aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
Cobalamin biosynthesis protein CobD n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210A7_RHOPB
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_1000_bf_scaffold_3169_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6613..8085)
DNA (1473bp) protein (491aa)
cobyric acid synthase; K02232 adenosylcobyric acid synthase [EC:6.3.5.10] rbh
Cobyric acid synthase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J263_RHOP2 rbh
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_1000_bf_scaffold_3169_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8282..8908)
DNA (627bp) protein (209aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ABD89281.1}; EC=2.5.1.17 {ECO:0000313|EMBL:ABD89281.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210A5_RHOPB
SCNpilot_cont_1000_bf_scaffold_3169_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8905..9081)
DNA (177bp) protein (59aa)
adenosylcobinamide-phosphate guanylyltransferase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Adenosylcobinamide-phosphate guanylyltransferase n=2 Tax=Rhodopseudomonas palustris RepID=B3QDM9_RHOPT
Bifunctional cobinamide kinase, cobinamide phosphate guanylyltransferase protein {ECO:0000313|EMBL:CAE26158.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_1000_bf_scaffold_3169_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9632..10687
DNA (1056bp) protein (352aa)
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003490837
SCNpilot_cont_1000_bf_scaffold_3169_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10688..11452
DNA (765bp) protein (255aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
cobalamin (5`-phosphate) synthase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A807F
SCNpilot_cont_1000_bf_scaffold_3169_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11568..12113)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MPV3_9RHIZ
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ETR76254.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_3169_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12103..13056)
DNA (954bp) protein (318aa)
Beta-lactamase-like protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV40_9BRAD
beta-lactamase-like
Beta-lactamase-like protein {ECO:0000313|EMBL:EAQ36181.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Displaying 13 items

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