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SCNpilot_cont_1000_bf_scaffold_3595

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_3595_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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52..1134
DNA (1083bp) protein (361aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteri
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Microbacterium yannicii RepID=UPI000308B6C1 rbh
SCNpilot_cont_1000_bf_scaffold_3595_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1159..1908)
DNA (750bp) protein (250aa)
short-chain dehydrogenase n=1 Tax=Agromyces subbeticus RepID=UPI0003B3468B rbh
oxidoreductase rbh
Oxidoreductase {ECO:0000313|EMBL:BAK33772.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_cont_1000_bf_scaffold_3595_3
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1905..2774)
DNA (870bp) protein (290aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68) rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Agromyces italicus RepID=UPI0003B5D71A rbh
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EHR60273.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
SCNpilot_cont_1000_bf_scaffold_3595_4
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2901..4034
DNA (1134bp) protein (378aa)
Mandelate racemase/muconate lactonizing enzyme domain protein (Fragment) n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WHT2_9ACTO
Fuconate dehydratase {ECO:0000313|EMBL:KFG01236.1}; Flags: Fragment;; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
racemase rbh
SCNpilot_cont_1000_bf_scaffold_3595_5
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4031..5011
DNA (981bp) protein (327aa)
pld1; Pyridoxal 4-dehydrogenase (EC:1.1.1.107)
aldo/keto reductase n=1 Tax=Humibacter albus RepID=UPI0003B6F3AA rbh
Pyridoxal 4-dehydrogenase {ECO:0000313|EMBL:EGG48524.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
SCNpilot_cont_1000_bf_scaffold_3595_6
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4999..5838)
DNA (840bp) protein (280aa)
D-arabinonolactonase n=1 Tax=Humibacter albus RepID=UPI0003B3ADDC
Amidohydrolase {ECO:0000313|EMBL:ELT43414.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
amidohydrolase 2; K07046
SCNpilot_cont_1000_bf_scaffold_3595_7
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(5835..6173)
DNA (339bp) protein (113aa)
hypothetical protein; K03534 L-rhamnose mutarotase [EC:5.1.3.-]
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B72E13
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_cont_1000_bf_scaffold_3595_8
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6170..6865)
DNA (696bp) protein (232aa)
GntR family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B56E07 rbh
GntR family transcriptional regulator rbh
GntR domain protein {ECO:0000313|EMBL:ACQ82278.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_1000_bf_scaffold_3595_9
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6994..8577
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348A116 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL18519.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_3595_10
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8598..9611)
DNA (1014bp) protein (338aa)
Putative ROK family transcriptional regulator n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AGN9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:AIY00964.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
xylR; xylose operon repressor
SCNpilot_cont_1000_bf_scaffold_3595_11
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9709..10989
DNA (1281bp) protein (427aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N8E9_MICTS
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AIY00963.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_3595_12
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11054..11983
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00037803E6 rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AIY00962.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_3595_13
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12208..12666
DNA (459bp) protein (153aa)
ABC transporter permease n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI0003619D5D
Putative ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AIY00961.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_3595_14
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12663..13580
DNA (918bp) protein (306aa)
Glucokinase {ECO:0000313|EMBL:EFQ83415.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EFQ83415.1};; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2]
Glucokinase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SAL9_9ACTO
SCNpilot_cont_1000_bf_scaffold_3595_15
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13577..14824
DNA (1248bp) protein (416aa)
arylsulfatase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4C79B
Uncharacterized protein {ECO:0000313|EMBL:AIY00958.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
arylsulfatase A family protein
SCNpilot_cont_1000_bf_scaffold_3595_16
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14818..16143
DNA (1326bp) protein (442aa)
alpha-L-fucosidase n=1 Tax=Agromyces subbeticus RepID=UPI0003B61D24 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM74286.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
alpha-L-fucosidase rbh
SCNpilot_cont_1000_bf_scaffold_3595_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16140..16874
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036A0ED8
Putative copper homeostasis protein CutC {ECO:0000313|EMBL:ERK71485.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein; K06201 copper homeostasis protein
SCNpilot_cont_1000_bf_scaffold_3595_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16882..18372)
DNA (1491bp) protein (497aa)
UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
UDP-N-acetylmuramyl peptide synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003779135
SCNpilot_cont_1000_bf_scaffold_3595_19
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18432..19121)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F2919B
Uncharacterized protein {ECO:0000313|EMBL:KHK99022.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
sortase-sorted surface protein
SCNpilot_cont_1000_bf_scaffold_3595_20
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19206..19571)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQY4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD35459.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
Displaying 20 items

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