ggKbase home page

SCNpilot_cont_1000_bf_scaffold_3927

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_3927_1
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..511
DNA (510bp) protein (170aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
GTP cyclohydrolase I n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FD6D3
folE; GTP cyclohydrolase I
SCNpilot_cont_1000_bf_scaffold_3927_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

538..2523
DNA (1986bp) protein (662aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C9A8B rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KHK98621.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_cont_1000_bf_scaffold_3927_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2523..3230
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372A103 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK99016.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
bifunctional deaminase-reductase domain-containing protein
SCNpilot_cont_1000_bf_scaffold_3927_4
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3406..5061)
DNA (1656bp) protein (552aa)
xpbC; DNA or RNA helicase of superfamily II; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12] rbh
helicase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000365E435 rbh
Helicase {ECO:0000313|EMBL:KHK98617.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_cont_1000_bf_scaffold_3927_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5073..5822)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036154AF rbh
Zn-dependent hydrolase, including glyoxylase {ECO:0000313|EMBL:EIC09199.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Zn-dependent hydrolase, including glyoxylase
SCNpilot_cont_1000_bf_scaffold_3927_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5864..7597)
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F7802C
Uncharacterized protein {ECO:0000313|EMBL:KHK98616.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_3927_7
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7599..7877)
DNA (279bp) protein (93aa)
multidrug ABC transporter ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037608E9
multidrug ABC transporter ATPase/permease
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KEP75338.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_cont_1000_bf_scaffold_3927_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8011..8394
DNA (384bp) protein (128aa)
cold-shock protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003495C84
cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family)
Cold shock proteins {ECO:0000313|EMBL:BAJ75731.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_3927_9
unknown

Not on your lists

8378..8476
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_3927_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8517..8816
DNA (300bp) protein (100aa)
primase n=1 Tax=Microbacterium paraoxydans RepID=UPI000380915E
Primase {ECO:0000313|EMBL:KIC60077.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_cont_1000_bf_scaffold_3927_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8899..9402
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003672E36
Uncharacterized protein {ECO:0000313|EMBL:CDK00898.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_cont_1000_bf_scaffold_3927_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9393..10145
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2Q3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08783.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_3927_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10689..11819)
DNA (1131bp) protein (377aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
serC; phosphoserine aminotransferase; K00831 phosphoserine aminotransferase [EC:2.6.1.52]
phosphoserine aminotransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FB149
SCNpilot_cont_1000_bf_scaffold_3927_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11893..13176)
DNA (1284bp) protein (428aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAK6_NAKMY
SCNpilot_cont_1000_bf_scaffold_3927_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13181..13969)
DNA (789bp) protein (263aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
glucosamine-6-phosphate deaminase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3D66E rbh
glucosamine-6-phosphate deaminase rbh
SCNpilot_cont_1000_bf_scaffold_3927_16
unknown

Not on your lists

comp(14010..14126)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 16 items

View Taxonomy