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SCNpilot_cont_1000_bf_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 245 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_25_1
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..134)
DNA (132bp) protein (44aa)
aldehyde dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000381C91C
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EGY00017.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCNpilot_cont_1000_bf_scaffold_25_2
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

385..1422
DNA (1038bp) protein (346aa)
NADP-dependent oxidoreductase domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NZ87_GRAMM rbh
NADP-dependent oxidoreductase domain-containing protein rbh
NADP-dependent oxidoreductase domain protein {ECO:0000313|EMBL:AEU36823.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_1000_bf_scaffold_25_3
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1463..4603)
DNA (3141bp) protein (1047aa)
cytochrome C peroxidase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B56C32 rbh
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AFL89579.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
heavy metal efflux pump rbh
SCNpilot_cont_1000_bf_scaffold_25_4
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4607..5815)
DNA (1209bp) protein (403aa)
RND transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3DB01 rbh
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV82931.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_1000_bf_scaffold_25_5
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5812..7020)
DNA (1209bp) protein (403aa)
transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B47F9E rbh
outer membrane protein rbh
Outer membrane protein {ECO:0000313|EMBL:AFL89581.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_1000_bf_scaffold_25_6
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7327..8550
DNA (1224bp) protein (408aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
histidine kinase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5E8FB rbh
signal transduction histidine kinase rbh
SCNpilot_cont_1000_bf_scaffold_25_7
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8547..9914
DNA (1368bp) protein (456aa)
acetoacetate metabolism regulatory protein AtoC n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7A552 rbh
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains rbh
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AFL89583.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_1000_bf_scaffold_25_8
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10403..11761
DNA (1359bp) protein (453aa)
transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B785F2 rbh
outer membrane efflux protein rbh
Outer membrane efflux protein {ECO:0000313|EMBL:ADV81874.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_1000_bf_scaffold_25_9
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11770..13056
DNA (1287bp) protein (429aa)
secretion protein HlyD n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5AB8B rbh
RND family efflux transporter MFP subunit rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV81873.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_1000_bf_scaffold_25_10
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13056..16151
DNA (3096bp) protein (1032aa)
Acriflavin resistance protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UWY5_TERSS rbh
Acriflavin resistance protein {ECO:0000313|EMBL:ADV81872.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
acriflavin resistance protein rbh
SCNpilot_cont_1000_bf_scaffold_25_11
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16198..17214)
DNA (1017bp) protein (339aa)
Gluconolactonase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZGZ3_TERRK rbh
gluconolactonase family protein rbh
Gluconolactonase family protein {ECO:0000313|EMBL:AFL88511.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_1000_bf_scaffold_25_12
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17266..18714)
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UWY3_TERSS rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_cont_1000_bf_scaffold_25_13
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18711..19391)
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UWY2_TERSS rbh
winged helix family two component transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADV81869.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_1000_bf_scaffold_25_14
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19522..24264)
DNA (4743bp) protein (1581aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X5E4_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW69491.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_1000_bf_scaffold_25_15

Not on your lists

comp(24272..26485)
DNA (2214bp) protein (738aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAN6_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39166.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
AAA+ family ATPase
SCNpilot_cont_1000_bf_scaffold_25_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26451..28313)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD91_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40468.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_17
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(28323..28550)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZBS3_ANACC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ55815.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
SCNpilot_cont_1000_bf_scaffold_25_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28618..31020)
DNA (2403bp) protein (801aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD93_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40470.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31030..32724)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD94_GEMAT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH40471.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_20
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32813..35287)
DNA (2475bp) protein (825aa)
Uncharacterized protein n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WDL2_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EID74478.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_25_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(35304..37484)
DNA (2181bp) protein (727aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD96_GEMAT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH40473.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(37505..39463)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD97_GEMAT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH40474.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(39467..39880)
DNA (414bp) protein (138aa)
Putative tail lysozyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD98_GEMAT
putative tail lysozyme; K06903
Putative tail lysozyme {ECO:0000313|EMBL:BAH40475.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(39877..40608)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD99_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40476.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_25
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(40617..41153)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADA0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40477.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(41154..42374)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADA1_GEMAT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH40478.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(42382..43077)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADA2_GEMAT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH40479.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_28
unknown

Not on your lists

comp(43083..43262)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_25_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(43265..43813)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADA4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40481.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_1000_bf_scaffold_25_30
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(43813..45870)
DNA (2058bp) protein (686aa)
Phage tail sheath protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADA5_GEMAT rbh
phage tail sheath protein; K06907 rbh
Phage tail sheath protein {ECO:0000313|EMBL:BAH40482.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Displaying items 1-30 of 245 in total

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