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SCNpilot_cont_1000_bf_scaffold_2141

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_2141_1
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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41..1417
DNA (1377bp) protein (459aa)
Transposase IS4 family n=1 Tax=Nocardioides sp. CF8 RepID=R7XXU3_9ACTO rbh
Transposase {ECO:0000313|EMBL:EWT05861.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
transposase
SCNpilot_cont_1000_bf_scaffold_2141_2
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2168..3046)
DNA (879bp) protein (293aa)
ISMsm2, transposase {ECO:0000313|EMBL:ABK74688.1}; Transposase {ECO:0000313|EMBL:AFP40865.1}; EC=3.1.1.73 {ECO:0000313|EMBL:AFP40865.1};; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
ISMsm2, transposase n=5 Tax=Mycobacterium RepID=A0QNI3_MYCS2
ISMsm2, transposase
SCNpilot_cont_1000_bf_scaffold_2141_3
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3170..3448)
DNA (279bp) protein (93aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KF46_SACES
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
phoU1; Phosphate transport system protein
SCNpilot_cont_1000_bf_scaffold_2141_4
unknown

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comp(3988..4404)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_2141_5
unknown

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comp(4401..4646)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_2141_6
unknown

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comp(4910..5260)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_2141_7
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5420..6235)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JD13_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP81152.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_1000_bf_scaffold_2141_8
unknown

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comp(6268..6714)
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_2141_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7095..8288)
DNA (1194bp) protein (398aa)
DMT family permease n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379EE5
Integrase {ECO:0000313|EMBL:EWC64482.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
DNA breaking-rejoining enzyme
SCNpilot_cont_1000_bf_scaffold_2141_10
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8399..8614)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AB7E
excisionase family DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADL45370.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_cont_1000_bf_scaffold_2141_11
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8860..9183
DNA (324bp) protein (108aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0G700_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:KJK51071.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_2141_12
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9426..11282)
DNA (1857bp) protein (619aa)
SAM-dependent methyltransferase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037B5FBD rbh
Uncharacterized protein {ECO:0000313|EMBL:EWM12010.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_2141_13
unknown

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comp(11600..11683)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 13 items

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