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SCNpilot_cont_1000_bf_scaffold_211

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_211_1
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..241)
DNA (240bp) protein (80aa)
Acetate permease n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1Z0G2_9BACI
SSS sodium solute transporter superfamily protein; K14393 cation/acetate symporter
Acetate permease {ECO:0000313|EMBL:KFD42786.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
SCNpilot_cont_1000_bf_scaffold_211_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(761..1516)
DNA (756bp) protein (252aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN90_PSEUX rbh
coenzyme F420-dependent NADP oxidoreductase rbh
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:AEA27114.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_211_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1604..2086
DNA (483bp) protein (161aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN89_PSEUX
Rrf2 family protein, putative transcriptional regulator {ECO:0000313|EMBL:EXG82064.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
BadM/Rrf2 family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_211_4
unknown

Not on your lists

comp(2093..2224)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_211_5
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2702..5416)
DNA (2715bp) protein (905aa)
Transcriptional regulator, LuxR family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB90_GEOOG rbh
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB74038.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
LuxR family transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_211_6
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5437..7869)
DNA (2433bp) protein (811aa)
Oxidoreductase FAD-binding region n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FHX1_SACEN rbh
oxidoreductase FAD-binding region; K05784 benzoate/toluate 1,2-dioxygenase electron transfer component rbh
Oxidoreductase FAD-binding region {ECO:0000313|EMBL:CAM03646.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
SCNpilot_cont_1000_bf_scaffold_211_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7878..8111)
DNA (234bp) protein (78aa)
Oxidoreductase FAD-binding domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB89_GEOOG
Oxidoreductase FAD-binding domain-containing protein; K05784 benzoate/toluate 1,2-dioxygenase electron transfer component
Oxidoreductase FAD-binding domain protein {ECO:0000313|EMBL:ADB74037.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_bf_scaffold_211_8
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8122..8637)
DNA (516bp) protein (172aa)
Benzoate 1,2-dioxygenase, small subunit {ECO:0000313|EMBL:ELQ90319.1}; EC=1.14.12.10 {ECO:0000313|EMBL:ELQ90319.1};; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
toluate 1,2-dioxygenase subunit beta (EC:1.14.12.-); K08686 2-chlorobenzoate 1,2-dioxygenase [EC:1.14.12.13] rbh
benzoate 1,2-dioxygenase subunit beta n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEA76 rbh
SCNpilot_cont_1000_bf_scaffold_211_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8643..9995)
DNA (1353bp) protein (451aa)
benzoate 1,2-dioxygenase large subunit; K05549 benzoate/toluate 1,2-dioxygenase alpha subunit [EC:1.14.12.10 1.14.12.-] rbh
Benzoate 1,2-dioxygenase, large subunit n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB87_GEOOG rbh
Benzoate 1,2-dioxygenase, large subunit {ECO:0000313|EMBL:ADB74035.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_bf_scaffold_211_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10206..11126
DNA (921bp) protein (307aa)
Transcriptional regulator, LysR family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB86_GEOOG rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADB74034.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_bf_scaffold_211_11
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11123..12223
DNA (1101bp) protein (367aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB85_GEOOG rbh
mandelate racemase/muconate lactonizing protein rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADB74033.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_bf_scaffold_211_12
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12250..13104
DNA (855bp) protein (285aa)
catechol 1,2-dioxygenase; K03381 catechol 1,2-dioxygenase [EC:1.13.11.1] rbh
catechol 1,2-dioxygenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE916 rbh
Catechol 1,2-dioxygenase {ECO:0000313|EMBL:ADB74032.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_bf_scaffold_211_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13101..13433
DNA (333bp) protein (111aa)
muconolactone delta-isomerase (EC:5.3.3.4); K03464 muconolactone D-isomerase [EC:5.3.3.4]
Muconolactone delta-isomerase {ECO:0000313|EMBL:ADB74031.1}; EC=5.3.3.4 {ECO:0000313|EMBL:ADB74031.1};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Muconolactone delta-isomerase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB83_GEOOG
SCNpilot_cont_1000_bf_scaffold_211_14
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13797..15500
DNA (1704bp) protein (568aa)
thiC; Phosphomethylpyrimidine synthase (EC:4.-.-.-) rbh
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; N
Phosphomethylpyrimidine synthase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JR72_SACES rbh
SCNpilot_cont_1000_bf_scaffold_211_15
unknown

Not on your lists

comp(15697..15825)
DNA (129bp) protein (43aa)
hypothetical protein n=2 Tax=Salinispora pacifica RepID=UPI000376518D
SCNpilot_cont_1000_bf_scaffold_211_16
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16224..16436)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037F8116
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD11768.1}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
SCNpilot_cont_1000_bf_scaffold_211_17
unknown

Not on your lists

comp(16738..16965)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_211_18
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17053..19341
DNA (2289bp) protein (763aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000363D449 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ32227.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
SCNpilot_cont_1000_bf_scaffold_211_19
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

19338..21638
DNA (2301bp) protein (767aa)
Membrane protein involved in the export of O-antigen and teichoic acid-like protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CSC7_TRURR
O-antigen and teichoic acid export membrane protein
Membrane protein involved in the export of O-antigen and teichoic acid-like protein {ECO:0000313|EMBL:ADI13659.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
SCNpilot_cont_1000_bf_scaffold_211_20
unknown

Not on your lists

22004..22174
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_211_21
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22332..23354
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037702EF rbh
Uncharacterized protein {ECO:0000313|EMBL:GAF46038.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_211_22
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23397..24497)
DNA (1101bp) protein (367aa)
acyl-CoA dehydrogenase (EC:1.3.99.3); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] rbh
Acyl-CoA dehydrogenase, N-terminal domain protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J1ZA93_9NOCA rbh
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AJW39987.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
SCNpilot_cont_1000_bf_scaffold_211_23
unknown

Not on your lists

25256..25411
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_211_24
unknown

Not on your lists

comp(25663..25812)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_211_25
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26598..27794)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037CD82C rbh
Mucin-2 {ECO:0000313|EMBL:EWM10448.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_211_26
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28536..29054
DNA (519bp) protein (173aa)
teicoplanin resistance protein VanZ n=1 Tax=Clostridium sp. JC122 RepID=UPI0002889C4A
Uncharacterized protein {ECO:0000313|EMBL:KHL04808.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
VanZ family protein
SCNpilot_cont_1000_bf_scaffold_211_27
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29218..29694)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4F9I2_SACEN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFL31912.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
SCNpilot_cont_1000_bf_scaffold_211_28
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29846..30427
DNA (582bp) protein (194aa)
RNA polymerase n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QX96_9ACTO
RNA polymerase
RNA polymerase {ECO:0000313|EMBL:CCK25552.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
SCNpilot_cont_1000_bf_scaffold_211_29
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30420..31088
DNA (669bp) protein (223aa)
Predicted protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X6M1_STRVR
Uncharacterized protein {ECO:0000313|EMBL:AJF70124.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_211_30
unknown

Not on your lists

comp(31411..31875)
DNA (465bp) protein (155aa)

This feature has no annotations

Displaying items 1-30 of 80 in total

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